Protein Info for CSW01_12365 in Vibrio cholerae E7946 ATCC 55056

Annotation: inorganic phosphate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 420 transmembrane" amino acids 6 to 28 (23 residues), see Phobius details amino acids 47 to 65 (19 residues), see Phobius details amino acids 88 to 109 (22 residues), see Phobius details amino acids 119 to 137 (19 residues), see Phobius details amino acids 146 to 166 (21 residues), see Phobius details amino acids 184 to 205 (22 residues), see Phobius details amino acids 217 to 236 (20 residues), see Phobius details amino acids 248 to 270 (23 residues), see Phobius details amino acids 302 to 321 (20 residues), see Phobius details amino acids 342 to 362 (21 residues), see Phobius details amino acids 368 to 388 (21 residues), see Phobius details amino acids 395 to 417 (23 residues), see Phobius details PF01384: PHO4" amino acids 26 to 407 (382 residues), 396.4 bits, see alignment E=5.2e-123

Best Hits

Swiss-Prot: 64% identical to Y1604_HAEIN: Putative phosphate permease HI_1604 (HI_1604) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

KEGG orthology group: K03306, inorganic phosphate transporter, PiT family (inferred from 100% identity to vco:VC0395_A2020)

Predicted SEED Role

"Probable low-affinity inorganic phosphate transporter" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (420 amino acids)

>CSW01_12365 inorganic phosphate transporter (Vibrio cholerae E7946 ATCC 55056)
MEILANYGTVLIIVAAVFGFLMAIGIGANDVANAMGTSVGSKALTVKQAIIIAMIFEFAG
AYLAGGEVTETIRNGVIETSLFADKPDVLIYGMMSALLAAGTWLLVASYMGWPVSTTHSI
IGAIIGFACVSVGTEAVDWSSVKGIVGSWIITPVISGFFAYLIFVSAQRLIFDTEKPLIN
AKRFVPVYMFITTMVIALVTIKKGLKHVGLHLSSSEAWMWSAVVSAIVMVGGYLYIQKKF
ANRDEDHGFAGVESIFSILMVITACAMAFAHGSNDVANAIGPLSAVVSTVEHMGEVAAKS
SIAWWILPLGGFGIVVGLATLGHKVMATIGTGITELTPSRGFAAQLATASTVVLASGTGL
PISTTQTLVGAVLGVGFARGIAALNLGVVRNIVASWVVTLPAGALLAVVFFYAIQAVFVG