Protein Info for CSW01_10360 in Vibrio cholerae E7946 ATCC 55056

Annotation: peptidase M16

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 939 PF00675: Peptidase_M16" amino acids 38 to 174 (137 residues), 115 bits, see alignment E=5.7e-37 PF05193: Peptidase_M16_C" amino acids 198 to 375 (178 residues), 118.7 bits, see alignment E=5.7e-38 amino acids 662 to 837 (176 residues), 53.1 bits, see alignment E=7.5e-18 PF16187: Peptidase_M16_M" amino acids 381 to 658 (278 residues), 300.8 bits, see alignment E=1.7e-93 PF22456: PqqF-like_C_4" amino acids 759 to 858 (100 residues), 97.1 bits, see alignment E=1.2e-31

Best Hits

KEGG orthology group: None (inferred from 100% identity to vco:VC0395_A1660)

Predicted SEED Role

"Protease III precursor (EC 3.4.24.55)" (EC 3.4.24.55)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.24.55

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (939 amino acids)

>CSW01_10360 peptidase M16 (Vibrio cholerae E7946 ATCC 55056)
MVFCDSSLTLPIRRNAVHISPNDTHQYRYITLSNGLRTLLIQSPDVQKCAAALAVNVGHF
DDPIERQGLAHYLEHMLFLGTEKYPKVGDFQTFISQHGGSNNAWTGTEHTCFFFDVLPNA
FAKALDRFSQFFIAPLFNAEALDKERQAVDSEYKLKIKDESRRLYQVQKETINPQHPFSK
FSVGNQHTLGDRENSSIRDEIIEFYQSHYSAKLMTLSLIGSQSFDELEAWAERYFAAIPN
PQRDIKPLPPFVDREHTGILIQIEPLKEIRKLILAFPMPSTESYYQKKPLSYFAHLIGYE
GEGSLLEALKEKGWITTLSAGGGVSGSNYREFAVSCVLTQEGLDHVDEIIQSLFQTLNLI
ATQGLQAWRYQEKRAVLESAFRFQETQRPLDMVSHLVVNMQHYAPEDTAYGDYMMSGYDE
ALLLHILSYLTPENLRATLIAKGGEYDKKAQWYFTPYSVRPFTTEQLHRFRQPLDLPISL
PEPNPFICYDLDPSEVKESHTLPQVLQDLPGFKLWHQQDTEFRVPKGVIYVAIDSPHAVA
NCRNIVMTRLCVEMFLDALAKETYQAEIAGMGYNLYAHQGGVTLTLSGFSQKLPQLMEVI
LRKFAQRDFQPKRFATIKQQMTRNWRNAAHDKPISQLFNAMTGLLQPNNPPYAELLAAID
DVQVEELAHFVDTILSQLHVEMFVYGDWPAAEAHKMAEVLKDALRVQGQTYEESLRPLVM
LGKSGTFQREVQCQQDDSAIVVYYQSHEVSPRSIALYSLANHLMSATFFHEIRTKQQLGY
MVGTGNMPLNRHPGLILYVQSPSAPPSELIRSIDEFLNALYMVLLELNEYQWHSSKRGLW
NQISAPDPTLRIRAQRLWVAIGNKDLSFDQREKVLEELKNLSRADMIRFVVNELKPRTAH
RLIMHTQGRAHHEAPALQLGQEIGSVEEFQLRPKAYDVG