Protein Info for CSW01_10150 in Vibrio cholerae E7946 ATCC 55056

Annotation: SulP family inorganic anion transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 519 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details transmembrane" amino acids 42 to 59 (18 residues), see Phobius details amino acids 65 to 81 (17 residues), see Phobius details amino acids 87 to 105 (19 residues), see Phobius details amino acids 117 to 135 (19 residues), see Phobius details amino acids 155 to 172 (18 residues), see Phobius details amino acids 179 to 198 (20 residues), see Phobius details amino acids 218 to 229 (12 residues), see Phobius details amino acids 240 to 262 (23 residues), see Phobius details amino acids 281 to 301 (21 residues), see Phobius details amino acids 311 to 333 (23 residues), see Phobius details amino acids 338 to 358 (21 residues), see Phobius details amino acids 369 to 401 (33 residues), see Phobius details PF00916: Sulfate_transp" amino acids 13 to 374 (362 residues), 203.4 bits, see alignment E=5e-64 PF01740: STAS" amino acids 416 to 505 (90 residues), 33.2 bits, see alignment E=3.9e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to vco:VC0395_A1617)

Predicted SEED Role

"Sulfate permease" in subsystem Cysteine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (519 amino acids)

>CSW01_10150 SulP family inorganic anion transporter (Vibrio cholerae E7946 ATCC 55056)
MFEFPSFSQHSIKNDVLSGLTVALALVPEAVAFAFVAGVDPMVGLYAAFIVGLITSIFGG
RPGMISGATGAMAVVMVSLVASHGVQYLFAAILLTGLLQVAAGLFKLGKFIRMVPHPVMI
GFVNGLAIVIFLAQLGQFKAPDLNGVMTWLPQKELLLMLGLVALTMAIIHFLPKLTTAIP
SSLAAIVTVTLLVQGLGLETRTVVDFLRAMSGNDAATLAGSLPSFSIPAVPLTWETLKII
FPYALILAAIGLIESLLTLTVLDEMTGTRGQSNRECMGQGLANITCSMFGAMGGCAMIGQ
SMINVNSGGRGRLSGIVAAVLLLCFILFTASLIEMIPLAALVGVMFMVVIGTFEWATFKL
ARRVPKQDFFVIVLVTVVTVFTDLAIAVAVGVIASALMFAWEHAKHIYAASHINPDGHKE
YHIHGPIFFGSAANFLELFDAHHDPKEVIVDFARSRVADHSAIDAIETLAERYAAVGKTL
HLRHLSQDCRALLQKVGSLVEINLKEDPTYKVASDVLAG