Protein Info for CSW01_08315 in Vibrio cholerae E7946 ATCC 55056

Annotation: magnesium transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 451 transmembrane" amino acids 285 to 305 (21 residues), see Phobius details amino acids 311 to 331 (21 residues), see Phobius details amino acids 359 to 380 (22 residues), see Phobius details amino acids 386 to 411 (26 residues), see Phobius details amino acids 420 to 442 (23 residues), see Phobius details TIGR00400: magnesium transporter" amino acids 40 to 447 (408 residues), 234.1 bits, see alignment E=1.4e-73 PF00571: CBS" amino acids 199 to 251 (53 residues), 25.7 bits, see alignment 1.2e-09 PF01769: MgtE" amino acids 319 to 440 (122 residues), 108.4 bits, see alignment E=3.1e-35

Best Hits

KEGG orthology group: K06213, magnesium transporter (inferred from 100% identity to vch:VC1655)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (451 amino acids)

>CSW01_08315 magnesium transporter (Vibrio cholerae E7946 ATCC 55056)
MMNVMKTNHSVVAAAQLKQLNEFARKLAHSSRRDKWVEKLFKLTEQEIHFVLQQLTGEQL
AELILLLSPPRAGHLLCVMDSNALNLGLAYANPRVVEKALRSLNEDELHGVFNMMNPINA
ERYRERLRWGEESVAAHMHTQRLALLESQTVVEAKEVLYESWGDSQARHRLYVVNQHGLL
LGAIDPKALLMAHSDQALSDLIEPQCLTLDADLDQEQAARLLLEHNLSVLPVVHQQQLVG
FFHLEEAVSILEKETTEDAEMQGGSMPLDASYLQTSPWQLWKKRIVWLLVLFVAEAYTGT
VLRSFEEQLEAAIALAFFIPLLIGTGGNSGTQITTTIVRAMAVGEVSLRNLGTVLRKELS
TSTLVALAMAMAAWIRAWTLGVGPEIGLVVMLTILAIVLWSALVSSVIPMVLRRMNVDPA
VVSAPFIATLVDGTGLIIYFEIAKLILPELA