Protein Info for CSW01_04910 in Vibrio cholerae E7946 ATCC 55056
Annotation: PhoH family protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 79% identical to PHOL_ECOL6: PhoH-like protein (ybeZ) from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
KEGG orthology group: K06217, phosphate starvation-inducible protein PhoH and related proteins (inferred from 100% identity to vco:VC0395_A0483)Predicted SEED Role
"Phosphate starvation-inducible protein PhoH, predicted ATPase" in subsystem Phosphate metabolism
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (367 amino acids)
>CSW01_04910 PhoH family protein (Vibrio cholerae E7946 ATCC 55056) MSNKIITLEINLEPSDNHRLASLCGPFDDNIKHLERRLGVEINYRGNFFTIVGQPHTAAA ALDIIKTLYVETAPVRGQITDIEPEQIHLAIKESGVLEQHSESSIAHGKEVFVKTKKGVI KPRTPNQAQYLMNMVTHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAG EKLGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLIERNVIEVAPLAYMRGRTLNDAF IILDESQNTTVEQMKMFLTRIGFNSRAVITGDVTQIDLPRGAKSGLRHAIEVLNEVDEIS FNFFQADDVVRHPVVARIVNAYEKWEAQDQKERKEYEQRRREERENKLLEMQRAEMTLSH NNESNPS