Protein Info for CSW01_04450 in Vibrio cholerae E7946 ATCC 55056

Annotation: aminobenzoyl-glutamate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 519 transmembrane" amino acids 35 to 57 (23 residues), see Phobius details amino acids 80 to 109 (30 residues), see Phobius details amino acids 130 to 161 (32 residues), see Phobius details amino acids 169 to 188 (20 residues), see Phobius details amino acids 217 to 236 (20 residues), see Phobius details amino acids 271 to 290 (20 residues), see Phobius details amino acids 310 to 332 (23 residues), see Phobius details amino acids 353 to 372 (20 residues), see Phobius details amino acids 392 to 412 (21 residues), see Phobius details amino acids 419 to 437 (19 residues), see Phobius details amino acids 449 to 468 (20 residues), see Phobius details amino acids 488 to 511 (24 residues), see Phobius details PF03806: ABG_transport" amino acids 19 to 517 (499 residues), 732.7 bits, see alignment E=1.6e-224 PF03606: DcuC" amino acids 160 to 457 (298 residues), 31 bits, see alignment E=1e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to vco:VC0395_A0389)

Predicted SEED Role

"Aminobenzoyl-glutamate transport protein" in subsystem p-Aminobenzoyl-Glutamate Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (519 amino acids)

>CSW01_04450 aminobenzoyl-glutamate transporter (Vibrio cholerae E7946 ATCC 55056)
MSNQAINQAPSAKPSGMDRFLNFIERAGNKIPDPAILFFWALVIVWVSSALLSNVSFDLT
NPRTNEALEIKNLLTGESLAHFLANMVTTFTSFAPLGIVLVAMLGVGVADSSGFITTGLK
KMLNVTPAKLLTPMLILVAIISHTAADAGYVLVIPLGGIIFHAAGRHPLAGIAAAFAGVS
GGFSANFIPSGIDPLLAGFTQTAAQVLDQSYQVNPLANIYFTGLSSIIIVAIGWYVTDKV
IEPRLAATKVDEDAESAPDLGSFTAIESKAFRYAGWAMVAGIALLVAAVWPENSALRSPD
GEITAFTAPIMKSIVPLIFLLFIIPGIVYGRVAGTFKNSNDVIKAMSATMSTMGAYIVMS
FFCAQFLSAFGQSNIGTMLALYGAEGLKAMNLPGQATIVGMILLTAMVNLLVGSASAKWA
LIGPILVPMLMAVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTL
ASMMMPYSIAMLIGWSLFLLVYWALGIPLGIQAPYTYTM