Protein Info for CSW01_02775 in Vibrio cholerae E7946 ATCC 55056

Annotation: glycerol-3-phosphate acyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 208 transmembrane" amino acids 6 to 25 (20 residues), see Phobius details amino acids 56 to 74 (19 residues), see Phobius details amino acids 81 to 100 (20 residues), see Phobius details amino acids 111 to 134 (24 residues), see Phobius details amino acids 136 to 136 (1 residues), see Phobius details amino acids 139 to 159 (21 residues), see Phobius details amino acids 162 to 175 (14 residues), see Phobius details TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase" amino acids 2 to 194 (193 residues), 248.1 bits, see alignment E=3.2e-78 PF02660: G3P_acyltransf" amino acids 11 to 184 (174 residues), 182.6 bits, see alignment E=3.3e-58

Best Hits

Swiss-Prot: 100% identical to PLSY_VIBCH: Glycerol-3-phosphate acyltransferase (plsY) from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)

KEGG orthology group: K08591, glycerol-3-phosphate acyltransferase PlsY [EC: 2.3.1.15] (inferred from 100% identity to vco:VC0395_A0051)

Predicted SEED Role

"Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.15

Use Curated BLAST to search for 2.3.1.15

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (208 amino acids)

>CSW01_02775 glycerol-3-phosphate acyltransferase (Vibrio cholerae E7946 ATCC 55056)
MTPLALSMIIFAYLLGSISSAVLICRVLRLPDPRNVGSQNPGATNVLRIGGKKAAVAVLL
CDMLKGTIPVWGGYFLNIEPFMLGLVAIAACLGHMYPIFFHFKGGKGVATALGAIAPIGL
DLTAMVMATWLVVVVLFRYSSLAALVTVLLAPLYTWLIKPQYTLPVAMLCCLIVLRHHQN
VKRLFAGTEPKVGEKNKKPSDDEESRVV