Protein Info for CCNA_01624 in Caulobacter crescentus NA1000
Annotation: orotate phosphoribosyltransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to PYRE_CAUVC: Orotate phosphoribosyltransferase (pyrE) from Caulobacter vibrioides (strain ATCC 19089 / CB15)
KEGG orthology group: K00762, orotate phosphoribosyltransferase [EC: 2.4.2.10] (inferred from 100% identity to ccr:CC_1555)Predicted SEED Role
"Orotate phosphoribosyltransferase (EC 2.4.2.10)" in subsystem De Novo Pyrimidine Synthesis (EC 2.4.2.10)
MetaCyc Pathways
- superpathway of histidine, purine, and pyrimidine biosynthesis (42/46 steps found)
- superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (17/18 steps found)
- UMP biosynthesis II (6/6 steps found)
- superpathway of pyrimidine ribonucleotides de novo biosynthesis (8/9 steps found)
- UMP biosynthesis I (5/6 steps found)
- UMP biosynthesis III (5/6 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.4.2.10
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See B8H621 at UniProt or InterPro
Protein Sequence (194 amino acids)
>CCNA_01624 orotate phosphoribosyltransferase (Caulobacter crescentus NA1000) MTNDDVLDEFRAAGALREGHFVLSSGLHSPVFLQKNLVFMRPERCERLCKALAQKIIATV GQVDVAVSPAVGGIIPGYETARHLNVPSIYVEREGGGFKFRRGFHLEPGQKVVMVEDIVT TGLSSRECIQAIKDAGGDVVAAACIVDRSGGKADVGVPLIALASLEVPAYPADALPPELA AIPIEDPGSRRLKG