Protein Info for CCNA_00290 in Caulobacter crescentus NA1000

Annotation: autotransporter protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1085 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_00290)

Predicted SEED Role

"putative autotransporter protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C5K7 at UniProt or InterPro

Protein Sequence (1085 amino acids)

>CCNA_00290 autotransporter protein (Caulobacter crescentus NA1000)
MSFVMQRKVLVATVAAAPLLAMGFAASAETPVSNARTTPIATSTATGTAADDIRITADGS
IKPTTAGAIVTIDSNHKVTNLGTLSTTGVNNGVGVLIIGGRTGALTNSATISLLEDYTAS
DSDSDGDLDGVFAQGANRFGVRLTNAGTFTGNIINEATGVISIEGNNSAGVLLEGPVVGN
ITNLGSISVTGDNAYGMRIAAPVTGKVTLGGQINVQGVNAVAQAIDANVSGALVLQGATS
ATGYRYTSRPSTTDALGKLDADDLQQGGPAVRIGGDVSGGLLLQGLNYSTKVNSDGTTTT
TTISSSSSGTSSINVFGAAPALQIGSASQNVTLGAVGSGDNAYGLIAKGAISAAGVYNGV
SATGVSIGAGGGRTTTLVGGLRNDGQITATSYEANATGVVLNSGATAASILNRGALTANA
ASFAGSGVTASARGLVIAAGASATSFGNSGSVSATRTGETGDAIAVLDQAGTLRTITNTG
SIRATVAAPTFKADGTVASVTATGRTIALDLRANNLGVNFTQSGPADFTSTSTFPSTDTT
TSATSATTTVAPSTIGDVLFGAGADTLNLWSGTLLGEMSFGAGQDRLSIDGGAIAVGKLY
DTDGKLDLSIANGSLAIANSDTINVSSVNLGSKAKLLFSADPTAGTNTKLVVSGATTIAS
GAELGIRMANLVKQPTTFTVIQGSNISVGTIGNSLLAESPYLYVATSRTDANNVYIDVRR
RTAAEIGFNRAESSAYDAVFSALGADSTLAATFLNQNSRDGFRDLYDQMLPDQGEGLFAA
LQTVNQQVSAATMFRPDPGDRYGPDSVWVQEINSLTRRDTDQTLGSDTQAFGFVGGYEAM
GDAGGALGLTLAYVSIEEHDTVAKVGEQTTASFVQSGAYWRRSVGGWRFNAGGGLGYAFF
QGDRRFIAPDSNGDGVADLVLKNSADWNGVTANAYAGMAYEQKFGRFFARPEGRFDYVWL
REGKRAEKGGGDAFDLTVDKRTSSNLSGELGVVMGADFGKQVWWRPEVRVGYRQTLAGSV
GDTVARFKGGNAFSLAAMDDKQGALTAGFALRAGTPMSYLALEGGVEAAKKQKRYNLRLS
GRAMF