Protein Info for CA265_RS25370 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: glycosyl transferase family 2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 365 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 144 to 160 (17 residues), see Phobius details amino acids 166 to 187 (22 residues), see Phobius details amino acids 268 to 287 (20 residues), see Phobius details amino acids 292 to 313 (22 residues), see Phobius details amino acids 325 to 347 (23 residues), see Phobius details PF13641: Glyco_tranf_2_3" amino acids 38 to 239 (202 residues), 36 bits, see alignment E=7.2e-13 PF00535: Glycos_transf_2" amino acids 41 to 207 (167 residues), 94 bits, see alignment E=1e-30

Best Hits

KEGG orthology group: K14597, chlorobactene glucosyltransferase (inferred from 38% identity to cph:Cpha266_2356)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZBZ6 at UniProt or InterPro

Protein Sequence (365 amino acids)

>CA265_RS25370 glycosyl transferase family 2 (Pedobacter sp. GW460-11-11-14-LB5)
MTIFIYAVLIFLVIRFSVTVFNFLSNPKLPRVVKHYHDQVSILIPARNEAENILALLDSI
KNQDYSNYEVIVLDDNSDDNTFQIVEKFCLTNPQFKVVSGEALPQNWLGKNYACHQLSEL
ATGKYFLFIDADESIKRGLINSLINRMEIGSLTLLSVFTNQSMKSIGEWLTVPLMHFILL
NLLPLRLVKLSKNPAFSAASGQCMFFNARHYKENHWHERVKHQIVEDVEIMKLVKQEKFN
AEALLANGLIYCRMYKNLGESLNGFSKNLLAGFGNNIIILLLYQLLVTIGPVILILNFNV
ALLVLPLTLIVLSRMMISYLSGQHVLINLILHPLQMLFFLIISFISIKKHIFKTGTWKGR
TIKAI