Protein Info for CA265_RS25295 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: DoxX family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 383 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 49 to 71 (23 residues), see Phobius details amino acids 79 to 99 (21 residues), see Phobius details amino acids 123 to 140 (18 residues), see Phobius details amino acids 152 to 172 (21 residues), see Phobius details PF07291: MauE" amino acids 3 to 135 (133 residues), 72.5 bits, see alignment E=4.3e-24 PF07681: DoxX" amino acids 8 to 92 (85 residues), 30.1 bits, see alignment E=6.3e-11

Best Hits

KEGG orthology group: None (inferred from 73% identity to phe:Phep_3661)

Predicted SEED Role

"FIG00907209: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZBZ3 at UniProt or InterPro

Protein Sequence (383 amino acids)

>CA265_RS25295 DoxX family protein (Pedobacter sp. GW460-11-11-14-LB5)
MRNILLRFSRIFVGALFIFSGLIKANDPLGFGYKLQEYFEVFHMNFLSGMATGIAILLCT
LEIVLGALLLLGFWSKKVAWGLLLLIIFFTLLTFVSAAFKVVTSCGCFGDAIPLTPWQSF
GKDLILLALIIVIFLNKNLIQPLFKKETTQRNIAIAVTVISLGFGLYTYNVLPIIDFLPY
KVGAHLPSLMVIPPGEKPDEFEIMYHLKNKKTNEEKDMSDKAYLKTEIWKDNNWEIIGEP
AKRLVKKGFEPKIKDLNITDASGTDYTKELIENPYYNLIFVAYDLHATNEAAIGKLNALA
LNATQQFNIRTVLLTSNSAQDAQAFIKKNNLFSEVFYADAVPLKSMVRANPGVLLMKNGV
VINKWHFHNVPTFDQLSRKYFDK