Protein Info for CA265_RS24600 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: glutaminase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 824 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF16334: DUF4964" amino acids 24 to 91 (68 residues), 88.9 bits, see alignment E=2.9e-29 PF17168: DUF5127" amino acids 251 to 473 (223 residues), 186.6 bits, see alignment E=1.2e-58 PF16335: DUF4965" amino acids 478 to 646 (169 residues), 229.1 bits, see alignment E=5.2e-72 PF08760: DUF1793" amino acids 652 to 816 (165 residues), 198.6 bits, see alignment E=2.2e-62

Best Hits

KEGG orthology group: None (inferred from 75% identity to shg:Sph21_0923)

Predicted SEED Role

"Glutaminase A"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZBX3 at UniProt or InterPro

Protein Sequence (824 amino acids)

>CA265_RS24600 glutaminase (Pedobacter sp. GW460-11-11-14-LB5)
MNKINTLKFLGILGCMFAGNMLKAQERKAPAYPLITHNTYFSIWSNTDKLNESATQHWTG
ADHSLLGMINVDGGIYRFLGKETTTYKTVVPASDEKAYEVKYTETEPQGDWKAANYTASN
WQTGNAPIGDDAKNVKTLWKSHDIWVRRTFNIVNPAAINELFLKINHDDNIEVYLNGKKI
YTKEGWTNNFQYIALSNSDKSALKAGSNVIAIHLINTAGGRFLDFGLVDRLKDNAEKVQI
AKQKSVDINATQTIYNFTCGKIDLKLTFTSPLLMNDLGLFARPVSYVSYQVKANDGKTHQ
VKVYLSASSNIAVYRPAQEVTASKYSTAKLSVLKTGTVEQPVLQKASDDMRIDWGYFYVA
APKTSNAIQFVTAEKDAADAFRKGNSASTAKQGKMLALNTVIPFGAVGKAAVEKYIELGY
DEIYSVQYFNKNLRPWWNTSGKETIEAQLTAAADEYKTVIQKCEAFNKTLYADALKSGGK
EYADLCVLGYRQSIAAHTLVKSPQGEILWLSKENNSGGFINTVDVTYPSAPLYLIYNPEL
LQGMLNGIFYFSESGKYPHPWAAHDLGTYPLANGQTYGEPMPVEESGNMIILTAAIAKAQ
GNADYAKAHWKTLTTWVDYLTKEGLDPKTQLCTDDFAGHLARNANLSVKAIVGIASYAQM
AQTLGYDDVAKKYRAIAESMVPKWIEMADAGDHYALTFDNKNTWSQKYNLVWDKVLKLNL
FPQKIYETETKYYLTKQNRYGIPLDSRKAYTKNDWILWTATFAPTQSEFEALVHPVYKHA
IETESRVPLNDFYDSNTGIRDNFKARSVVGGFYMKMLADKLAGK