Protein Info for CA265_RS24045 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: SIMPL domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 228 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF04402: SIMPL" amino acids 29 to 225 (197 residues), 110.3 bits, see alignment E=7.9e-36

Best Hits

KEGG orthology group: K09807, hypothetical protein (inferred from 69% identity to phe:Phep_0417)

Predicted SEED Role

"FIG00908291: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZBC4 at UniProt or InterPro

Protein Sequence (228 amino acids)

>CA265_RS24045 SIMPL domain-containing protein (Pedobacter sp. GW460-11-11-14-LB5)
MKKLIALALVAFLGLSTAMAQQVDLRRKINVSGTAETEVTPDIIYIGISLKEYLNGKKKV
DITELEKQLYAAVQKAGIAKENLTISNLSSWNYAAEKKKNPDFLASKQYRLKVSDLNKFN
AILESIDAKGIANTNIESYDYSKIESLKKELKIKALLAAKEKAAYMVEALGDKLGGVIEI
QDGGDNVIQPVYRNYAMKAEMADAASAPEIDFKKIKLNFTVNAIFEIK