Protein Info for CA265_RS22895 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: aminodeoxychorismate/anthranilate synthase component II

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 198 TIGR00566: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase" amino acids 9 to 193 (185 residues), 183.3 bits, see alignment E=2.1e-58 PF00117: GATase" amino acids 10 to 192 (183 residues), 166.8 bits, see alignment E=4.7e-53 PF07722: Peptidase_C26" amino acids 76 to 177 (102 residues), 24.9 bits, see alignment E=1.6e-09

Best Hits

Swiss-Prot: 47% identical to PABA_ECOLI: Aminodeoxychorismate synthase component 2 (pabA) from Escherichia coli (strain K12)

KEGG orthology group: K01658, anthranilate synthase component II [EC: 4.1.3.27] (inferred from 79% identity to phe:Phep_4169)

MetaCyc: 47% identical to aminodeoxychorismate synthase subunit 2 (Escherichia coli K-12 substr. MG1655)
Aminodeoxychorismate synthase. [EC: 2.6.1.85]

Predicted SEED Role

"Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)" (EC 2.6.1.85, EC 4.1.3.27)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.6.1.85, 4.1.3.27

Use Curated BLAST to search for 2.6.1.85 or 4.1.3.27

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZDE4 at UniProt or InterPro

Protein Sequence (198 amino acids)

>CA265_RS22895 aminodeoxychorismate/anthranilate synthase component II (Pedobacter sp. GW460-11-11-14-LB5)
MEDINKKTVLVIDNYDSFTYNLVHLINEVGYEAEVWRNDKFDLADVEKYDKILLSPGPGI
PEEAGLLLDVIRTYAPTKSIFGVCLGQQAIAEVFGGTLLNLGRPMHGIATPVTVVDGDEP
LFWECPQTINVGRYHSWVVSKDNFPSCLKITARDHKSEIMALRHETLDVRGVQFHPESVL
TEYGKQMMENWLSSSTTV