Protein Info for CA265_RS22360 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 529 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details transmembrane" amino acids 296 to 314 (19 residues), see Phobius details PF06580: His_kinase" amino acids 338 to 412 (75 residues), 67.2 bits, see alignment E=1.3e-22 PF02518: HATPase_c" amino acids 434 to 525 (92 residues), 29.9 bits, see alignment E=6.7e-11

Best Hits

Predicted SEED Role

"Autolysin sensor kinase (EC 2.7.3.-)" (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZB60 at UniProt or InterPro

Protein Sequence (529 amino acids)

>CA265_RS22360 hypothetical protein (Pedobacter sp. GW460-11-11-14-LB5)
MKKIFLSIYLLLFAFGANAQKNKYLVDEYGNPMHYSIAVRYSKYNIFLVVDSGTKKVTPF
EYLNGSHLGNIVLLQKAKSIELESRIQKDSLKFYRYSIIENDSIILKKNAIPERIKYKWG
SGSILPNYVAADLGAFNVVDKKLEIKIFRINNEKNTTSVIIYNKPLLAPSSLSFNILGTN
STKNVKNNTNLIVDEKVKGLRIAMKNTDINVLYAIIVENIDAHSTTMLEPRWKPIKTGGI
VIGDIDVSEFTKPGKYKISIYPKTHPYAYWKDNTLTKDFLFTVEKPKEKFFTAKELLSSV
IVGGLCGLISVLILNNRKKKAAKILTQKSQEKEIARLQLESVRSQLNPHFLFNALAGIQT
LMNKNEIDNANRYLVKFARLTRNVLDHKDLISLTSEKTLLDDYLQMEQLRFGFQYQITAS
ADLDVENIEIPAMLLQPFVENAVKHGIAEKGSEGKVEISFTAQLTDLILSIKDNGIGFDV
NKDYTGLGLALSKNRISLLNSIYKETPFLLDMKADKDGTIIKITLSHWL