Protein Info for CA265_RS22095 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 379 transmembrane" amino acids 264 to 284 (21 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 61% identity to cpi:Cpin_4866)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZBE6 at UniProt or InterPro

Protein Sequence (379 amino acids)

>CA265_RS22095 hypothetical protein (Pedobacter sp. GW460-11-11-14-LB5)
MIKPLKYKSINWINGMKLSSDHFTVSDLYLQDFVRDAVSIHLNNSNYGFLPPFTGYKSSH
DIEIIEKATNHIEVRVRYCNAITPEGCHIDIVQSDNMDTLVHNHYFGQSEPRNYVILLVV
SPFNRVPTGTPNPEESPIRYPELAKSYSIAVLPESEVSTQTADSYFLTIGQVYYENGRLT
INNNYIPPSSTITSHPALIRYYESFSVLLNDLQLAAFKIIDKTGGRDNITPLGKNIRLIS
EKIVDYIAGLFYEYRNIAHRESPAVLTGYFSSLAHIFFTAIKLIDPREREELLKYFYEWK
DVTPGNFEELLAKTIELVYDHKQINNSMLMASEFMNVLVALWNKLSGLEYIGQRKENIVV
AEQQVVQQVQARKTWTLLD