Protein Info for CA265_RS21880 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: futalosine hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 207 transmembrane" amino acids 33 to 50 (18 residues), see Phobius details TIGR03664: futalosine hydrolase" amino acids 3 to 202 (200 residues), 179.5 bits, see alignment E=4e-57 PF01048: PNP_UDP_1" amino acids 37 to 195 (159 residues), 43.1 bits, see alignment E=1.7e-15

Best Hits

KEGG orthology group: K01243, S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC: 3.2.2.9] (inferred from 60% identity to phe:Phep_4151)

Predicted SEED Role

"Menaquinone via futalosine step 2" in subsystem Menaquinone Biosynthesis via Futalosine

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.2.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZBA7 at UniProt or InterPro

Protein Sequence (207 amino acids)

>CA265_RS21880 futalosine hydrolase (Pedobacter sp. GW460-11-11-14-LB5)
MKTLVVAATKAELAFFYQHFNLPDGDFVESKNFDLLITGVGMVATAFALGKHLSSKYDLV
VNFGIAGSFDRNLALGTVLHITEDTFAELGAENGDEFLTISDLGFGENHYTSKTHQSVSL
PIAKGITVNCVTGSEKSIKNLIKRLNPTTESMEGAAVFYACKQLNVDCLQIRSISNYVEP
RNKDNWKIGLAIKNLNDWAIAFVGEMN