Protein Info for CA265_RS21840 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: phosphohydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 214 PF01966: HD" amino acids 27 to 126 (100 residues), 35.6 bits, see alignment E=5.2e-13

Best Hits

KEGG orthology group: K06950, uncharacterized protein (inferred from 68% identity to phe:Phep_0195)

Predicted SEED Role

"HD domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZBH9 at UniProt or InterPro

Protein Sequence (214 amino acids)

>CA265_RS21840 phosphohydrolase (Pedobacter sp. GW460-11-11-14-LB5)
MQATIQKTIDFVKKTLADAEAGHDWFHIERVFKTAQTINQQENGDELVVAFAALLHDIAD
PKFNNGDEELGPNMAASFLASIAVDAEVIAHVKLIIQNMSFKNSFDGASFTSKEMQIVQD
ADRLDAIGAIGIARAFTYGGFKNRVLYDPAILPEEHLTKESYKNTTAPTINHFYEKLLLL
KDMMNTDAGKAIATERHNFMLLYLEHFYKEWDGK