Protein Info for CA265_RS21480 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: GNAT family N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 155 PF13673: Acetyltransf_10" amino acids 36 to 132 (97 residues), 41.2 bits, see alignment E=2.3e-14 PF00583: Acetyltransf_1" amino acids 44 to 129 (86 residues), 68.1 bits, see alignment E=1.3e-22 PF13508: Acetyltransf_7" amino acids 50 to 130 (81 residues), 60.9 bits, see alignment E=1.9e-20

Best Hits

KEGG orthology group: None (inferred from 64% identity to dfe:Dfer_1018)

Predicted SEED Role

"Predicted acetyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZA25 at UniProt or InterPro

Protein Sequence (155 amino acids)

>CA265_RS21480 GNAT family N-acetyltransferase (Pedobacter sp. GW460-11-11-14-LB5)
MSDLTLIRTNSDDTDFRNLVALLDKDLAVRDGDDHAFYAQFNKVDTIKEAVVAYQDGCPV
GCGAIKPFSATEAEVKRMFVHPDYRNQGIAAQVLNELESWATELGFAACVLETGKKQPEA
IALYQKVGYHITPNYGQYIGVDNSVCMSKPLNAKP