Protein Info for CA265_RS21325 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: cellulase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 834 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details PF02927: CelD_N" amino acids 29 to 111 (83 residues), 66.1 bits, see alignment E=6e-22 PF00759: Glyco_hydro_9" amino acids 123 to 591 (469 residues), 227.6 bits, see alignment E=6e-71 PF01522: Polysacc_deac_1" amino acids 616 to 749 (134 residues), 45.7 bits, see alignment E=9.3e-16

Best Hits

Predicted SEED Role

"FIG01093606: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZA65 at UniProt or InterPro

Protein Sequence (834 amino acids)

>CA265_RS21325 cellulase (Pedobacter sp. GW460-11-11-14-LB5)
MKNKFFLALTFSFVLCFLCSFMAVQRKIQQSWIRINLLGYPTESIKVAVWASKTGELPAK
FEIITKETNQVVYTSTNIKSFSHYGPFSQTARLNFSDFKSKGSFYLRANGILSPLLLINN
NVYEGAADFCLQYMRQQRSGFNPYLKDSCHTHDGFVLYGAKAGLKDSTHIDASGGWHDAS
DYLQYSTTSANATYHLLMAYRDFPKVFNDQQLANGLDGKNGIADVLDEAKWGLDWLLKMH
PLKNIMFNQLADDRDHISMRIPKEDSQYGKGFERPLYFITGEPQQRGKFMNNTTGTSSTA
AKFTSAFNLGSVLFKGRDRAYAQTLAKKAKTAYIFALQKPGVTQTASVKSPYIYAEDNWV
DDMELAETSFNFGREKADQKKIKLALNYARQESTTPWLQKDTAAHYQYYPFINLGHYEIA
RQDLKDRTAINYYQEGIKQVWNRAKNNAFYRGVPFIWCSNNLTVSFAIQCHWYATLSGDK
TYSELEQANFDWLFGCNPWGTSMVYGLPQWGDTPADPHSAFTHLKNYPINGGLVDGPVYT
NIYKGLIGIKLNDSDEYADFQSDLAVYHDDYGDYSTNEPTMDGTASLIYLLAAKEAQAYP
LADHKTYSYGAIIRGDSTQKKIYLVFTGDEYADGAETISKVLAQEKVKASFFLTGNFYRN
PNFNSLIKKLKNDGHYLGPHSDQHLLYCDWNKRDSLLVTKTGFETDLNKNYQAMANFGIN
KEAAGYFLPPYEWYNQTIADWAKAQGLQLINFTPGTRSNADYTYPEMGKSYRSSDEIYRS
ITAFNETKPNGLNGFILLLHIGTDARRTDKFYNRLAELITYLKRADYKLARIDN