Protein Info for CA265_RS17675 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: molecular chaperone HtpG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 626 PF02518: HATPase_c" amino acids 27 to 175 (149 residues), 30.3 bits, see alignment E=7.4e-11 PF13589: HATPase_c_3" amino acids 27 to 138 (112 residues), 37.7 bits, see alignment E=3e-13 PF00183: HSP90" amino acids 210 to 601 (392 residues), 182.2 bits, see alignment E=3.2e-57

Best Hits

KEGG orthology group: K04079, molecular chaperone HtpG (inferred from 83% identity to phe:Phep_0051)

Predicted SEED Role

"Chaperone protein HtpG" in subsystem Protein chaperones

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZDH0 at UniProt or InterPro

Protein Sequence (626 amino acids)

>CA265_RS17675 molecular chaperone HtpG (Pedobacter sp. GW460-11-11-14-LB5)
MQEKGNISIHTENIFPIIKKFLYSDNEIFLRELVSNAVDAVQKIKRLGSLGQFNGEVGQP
LVQVAVDKDAKTITISDNGLGMTAEEIKKYINQVAFSGASEFVEKFKDAKDANEIIGKFG
LGFYSAFMVADLVEIQTLSYQDGAEPARWVCDGSTEFEITEGTKTTRGTDIILHVNKDSE
EFLAESKLQEILDKYAKFLPVPIKFGTKTESVEDGVDEEGKAKYNDVEVDNIINTTNPIW
TKAPADLSDEDYLNFYRELYPFSEEPLFWIHLNVDYPFNLTGVLYFPKLKNDFEMQRNKI
KLYSRQVFITDEVKDIVPEFLMLLHGVIDSPDIPLNVSRSFLQADSNVKKINNYITKKVA
DKLGELFAKDRKAYEDKWKDIGLFVKYGMISEEKFYDKAKDFALVGNTKNELFTLPEYKE
KVSALQTDKNGTVVYLYTNDAAKQDAFIQSANKKDYDVLLLDSPIDNHFINQLEQKLEKT
SIKRVDSSVADKLIEKDEQNEHVLTEDQVKEVTTIFEKAITKPGMHVEIVALHPEELPVT
ITMDEFMRRMKDMAAMGGGMGFYGQMPDNYKVAINGNHKLVSKILKAEGEEQSNLAKQAV
DLALLAQGMLTGAELTAFVSRSVELI