Protein Info for CA265_RS16070 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: peptide-N-glycosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 561 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details TIGR01200: GLPGLI family protein" amino acids 2 to 185 (184 residues), 50.8 bits, see alignment E=9.5e-18 PF09112: N-glycanase_N" amino acids 211 to 388 (178 residues), 199.9 bits, see alignment E=3e-63 PF09113: N-glycanase_C" amino acids 418 to 557 (140 residues), 156 bits, see alignment E=5e-50

Best Hits

Predicted SEED Role

"FIG01092483: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z774 at UniProt or InterPro

Protein Sequence (561 amino acids)

>CA265_RS16070 peptide-N-glycosidase (Pedobacter sp. GW460-11-11-14-LB5)
MKHLYILTFFLFISFGANAQALLKSNVVYKIVYFRSSDGKPKEDRNATVILASANQNLIS
NAAILDHKAKYPYEQSIVTKPAQILFQVADLSTDKQIATADSTAIGKQTFELSNETKVIL
GYTCKKATTVVNSNRIDLWYTTDAGIKAAPTSLGQNLGLVLEQVRNGSSYVTATKIEAVK
NPKPIDLQQISAKLTDGLTYKDLLWKSRFTTLSIFNNETINFIDKPQSNDSVFRFAGGTV
IARKVKFPELQSKPNVFVDLTEQSNGDAYDRTGSVFIIPTDKQISLMDALKNSVKDLPVY
DNGNGKKYQGVVATANYNPVIELMRFFTPFGVGKYNTLKLKDKNWAEKVYYRQDVSELFP
LVNGKEVWVAVFVGNYDKGGHKVSLNITLHNGGRQKEAKEVILPLFNSTNVMEMAGQEYA
TMFSSDKGLEVSFTLAKDLKDAKLRYITTGHGGWGNGDEFVPRKNTIWLDEKEAFAFTPW
RQDCGSYRLSNPASGNFETGLSSSDLSRSNWCPGTVTNPEWISLGDLKAGPHTIKVTIPM
GKPEGSSSSAWNVSGVLLGEE