Protein Info for CA265_RS15400 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: CDP-alcohol phosphatidyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 transmembrane" amino acids 7 to 26 (20 residues), see Phobius details amino acids 32 to 52 (21 residues), see Phobius details amino acids 67 to 84 (18 residues), see Phobius details amino acids 89 to 89 (1 residues), see Phobius details amino acids 94 to 112 (19 residues), see Phobius details amino acids 123 to 141 (19 residues), see Phobius details amino acids 147 to 170 (24 residues), see Phobius details PF01066: CDP-OH_P_transf" amino acids 3 to 158 (156 residues), 56.4 bits, see alignment E=2.4e-19

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z7D9 at UniProt or InterPro

Protein Sequence (200 amino acids)

>CA265_RS15400 CDP-alcohol phosphatidyltransferase (Pedobacter sp. GW460-11-11-14-LB5)
MKHIPIALIYARLLIGFGIILLSLFHANHYSFLAITLLSIGLLTDVFDGIIARKLNISSE
KLRRLDSGIDQVFFISVAVATYLQCPDFFKANLVKLIVLGAFEASTYALSYIKFKKEIAT
HSIGAKIWTLILFATLVEIMVHCESVLLFELCLWIGLATRLEILAIVFTLKKWTNDVPTI
YHAVKLRQGKEIKRNKLFNG