Protein Info for CA265_RS14090 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1565 PF04255: DUF433" amino acids 1509 to 1563 (55 residues), 34 bits, see alignment (E = 3.2e-12)

Best Hits

Predicted SEED Role

"Possible restriction /modification enzyme"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z770 at UniProt or InterPro

Protein Sequence (1565 amino acids)

>CA265_RS14090 hypothetical protein (Pedobacter sp. GW460-11-11-14-LB5)
MNYSSINVHGNLLSEDVLKKIESADIHGQAQVDFKIDGGSNLRSEIEYAWSRIKLDWAQF
QAKSQKLPDSDPYGTTLTRKWMRNFFDSLGFELRDQRMSLVGDNGQNYFISHTAENLDGL
PVHIVGFTEPANPNKSTLDIKTSGGTSRYSPHGTMQEYLNVTEHLFGIAANGLYVRLMRD
TGHLIKLTYVEFDLRRMLEEDKYSEFTLLYRLIHASRFPVYKQDADQCLLQSYFLESIET
GNRIRNGLSKAVKKSLEALGHGFLKHPDNEQLREALLFNRFTAADYYRQLLRVIYRLLFL
MVTEERGLVFDAEDKSEKTLRLKDIYWQFYSIARIREFSEKRHAYETQYQDLWQGLVNTF
RLFEGEGNGMTLGILPLDGDLFNSEGIAMLQGSSINNKLLLECISNLNEFRDENDFLVSI
NYRSLDVEELGSVYEGLLELHPVVENLDAANPANIFFKFLGGTDRKTTGSYYTRPELVNE
LINSALIPVIEKKINTAQNKEAKIEALLALKVCDSAVGSGHMLLAAARTIAWYMARLHSG
DENPSKPVYQKCLRDAIQHCVYGVDMNPDAVELCKLALWLEGHNCGKPLSFLDHKIRNGN
SLVGVKDFSVLSKGIPDEAFAFVTGDDKEVCRELKKANASFKKMQQYDLFGKANVVEEYH
NFSNEFHDLEDIDQDDVAAVRLVKNLFYSLRSNSTWEKDRLACDIWTAAFFFNYTQENKL
AAPLSESLLDFLRNPQGIDESTLKMATELSAQHKFFHWPLEFPDVFENGGFDVILGNPPW
ERIKLQKEEYFATRDSAIANAANGSARTRMIKELKELNPTLFKAFEGAVHDSESVGKFLR
FSGRYNLTAVGDINTYSVFSELARSLIHESGRVGIIVPTGIATDDSNKAFFSEMVEQNCL
VSLFDFENKEAIFPSVHRMYKFCLLTLAGTDIGKQKINFGFFLTKISHLKDKLRIFNLDK
TDFFRLNPNTKTCPVFRTSVDAELSKAVYNRMGVFINDVEKQNPWGAYYIRLVDLGDHQN
EIEMVHLRDTNVYQVPIYEAKLFWQMDHRFSTFKDQTNLAIENGTSLQLSVEEKMNPDSQ
IAVRYYAKAELKELLFSKYKDYDSNYFVLWRDVTNATNERTSVASAVPKVLASRSSPGIG
FEKSLPGYLLVANLNSIVYDYFVRQKVSGLHFNWGLLKQTPVIPPHLYSPEDLYYIAPRC
MELIYTAWDIKGFADDFWRDAGKELKEKVEQQWEDNRSFGDQKLMSEENESLINGCPLPP
FIWNEQRRAVLKAEIDVIYAKIYGLSQRELKYVVDPQDVYGADFPGETFRVLKDRENRNY
GEYRTKKFIEQAYDNFHNIALPVLKIKTEMIDLSLHQGIYSIWETAMITRFSSQKVTSWF
KELEKAHYEGVGNKTSSTGETRISFHGLIELVVIGTLRDNGISLKRILKARADLSTKTGK
IYPFATNNVNKSLKVSGNDIVWEFDDGVKVTLDGTSQINIDLIALFFRDIIFNNDIAEKM
MPSRGNNMVVIDPKIGLGKPVIVNKEVPVDIVASSYKHNPGSLDILKEQYDLTQEEVMAA
VAYMN