Protein Info for CA265_RS11120 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: phosphohydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 404 transmembrane" amino acids 255 to 277 (23 residues), see Phobius details amino acids 283 to 303 (21 residues), see Phobius details amino acids 324 to 341 (18 residues), see Phobius details amino acids 353 to 369 (17 residues), see Phobius details amino acids 379 to 401 (23 residues), see Phobius details PF01966: HD" amino acids 31 to 129 (99 residues), 29.5 bits, see alignment E=7.9e-11 PF18967: PycTM" amino acids 276 to 386 (111 residues), 112.2 bits, see alignment E=1.6e-36

Best Hits

KEGG orthology group: None (inferred from 36% identity to paa:Paes_0935)

Predicted SEED Role

"Metal-dependent phosphohydrolase, HD subdomain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z5K6 at UniProt or InterPro

Protein Sequence (404 amino acids)

>CA265_RS11120 phosphohydrolase (Pedobacter sp. GW460-11-11-14-LB5)
MNYKQLQEDVEKHVGDYFHTHNDPRLVYHNLEHTQEVVNAAQQIANHYQLNEQDFFAVTV
AAYFHDTGYFEDALNHEAKGAELADHFLAKHQVNQEIRDHVKSAILATKIPQKPKNEIDK
ILCDADLFHLGLADFRAKGKLMHKENELIYKKDISKLDWRKKDIQFMESHHYHTDYATLL
LSDQKQKNISKLKSKLTAQEEISTELAETKNFAPNVVQGKKKKDKDDRPDKGIETMFRIT
SANNQRLSDMADNKAHILITVNSIMLSLIVSLLLRRLEDHGNLIIPTFILLLVSLTCVVV
SILSTRPSIPKGEFTQEDMDKKKVNLLFFGNFYKMSLPSYTDGMIKVMNDKDFLYGTLIT
DVYSQGVVLGRKYKLIRLAYNIFMFGLIAAVLAFVIAYAAYGKL