Protein Info for CA265_RS10165 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: heme-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 868 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details TIGR02603: putative heme-binding domain" amino acids 733 to 865 (133 residues), 88.7 bits, see alignment E=1.7e-29

Best Hits

KEGG orthology group: None (inferred from 70% identity to sli:Slin_6252)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z502 at UniProt or InterPro

Protein Sequence (868 amino acids)

>CA265_RS10165 heme-binding protein (Pedobacter sp. GW460-11-11-14-LB5)
MIKFSLSLISFTLVFFGLKNFFSEPRIQRVSPPELTITNFAGPDVTPSPACLAVAPTGEV
YVGVDMIGSLGKDPGKGHILKLIDKDNDGKMDEHVDFAEVDNPRGIIVQGSQVYVLHTTF
SKETKQATGMNLVVFEDKDGDGKADGPEKPLIEHISNAKYIRERGTDHATNGIRMGIDGW
IYISVGDFGFHDAVDRSGKKLTMLGGGIMRVRPDGTEMEVYTHGTRNVYDVAIDPYMNVF
TRENTNDGGGWNVRFSHHIQSGEYGYPVLFQNFTDEIIPALADLGGGSGTGALFMDEPNW
PEQYNHVPMMADWGRSMLYIHRVTTDGPTFTQKDEDFIKLPQITDLDVDGSGRLYLSAWD
GAGYSGSPNKGYIVRAVPNNWTYKAFPDVKKASIKKLTELLKSNSAVGRLTASQELVARN
NKQAIATALKVASDQGLALDVRIAGIYTYAQLTKENGIATLVEFTKDKAVKEFALKALAD
RKGSIGKVPVEPFLEGLKDPSVRVQAASIIGLNRLGRAEVANVLLQTKVPASFTAPAKGT
EGPHATPNSAIILPHLAVRALVDLQAVDALLAAVKTENSTLALWALRYIHTEKAVNGLIE
NYKQSNDEKLKQQILVTLGRLYKKEIAYDASWWWGTRPDSHGPYFKAVSWEGSPIIEKFL
KEEATKAGAQGKQFYVDLNARQRMDIPEFAEEEKVAATEEPKIDLDKIKNKKGQVGKSSI
EDVLLAINKLQGNPLKGRNIFNSQGCVACHSLSKSEKMKGPFMGQIGSIMNREQIAESIL
KPNASISQGFASVMISAKGDRTYMGFITEETAAKVVVRNIAGEVFTIKAGDILSRKEMET
SMMPEGLANSLSYEELASLVTFLSEQKK