Protein Info for CA265_RS10045 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: peptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 432 transmembrane" amino acids 26 to 50 (25 residues), see Phobius details amino acids 163 to 183 (21 residues), see Phobius details amino acids 214 to 235 (22 residues), see Phobius details amino acids 371 to 393 (23 residues), see Phobius details PF03929: PepSY_TM" amino acids 25 to 394 (370 residues), 215.4 bits, see alignment E=8e-68

Best Hits

KEGG orthology group: None (inferred from 79% identity to phe:Phep_2514)

Predicted SEED Role

"putative iron-regulated membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z4T6 at UniProt or InterPro

Protein Sequence (432 amino acids)

>CA265_RS10045 peptidase (Pedobacter sp. GW460-11-11-14-LB5)
MATVNKTIPAKKKNKDSLFTRINKWLHLWLGLISGVIVLIVCITGCIWVFNEEITGLLEP
ETKIEKQDKPVISPSQLSAIAFKLYPAKVPAYAQYQQGRAISLNLKGKKDEGRRGGGTIL
KINPYTGEVISTVVHKKGEVDFFRFILNGHRFLWLPYAIGRPIVNYGTMIFVVLLITGLI
WWYPKKWNKSTRDKSFKIKWGASFKRVNLDLHNVLGFYSLIFLLFIALTGMVYGIKWYSE
GLYWVTSGGDKLGDFQRLESDSLALGKFYTPQKAMDLAWEKVIRRHPKSEGFYYNFPDTS
KAKATINITVYPNTGQFYNNQGYTFDQHTLKEFKREGVYSIAYEEAGFGGKLRKMNYDIH
VGSILGFPGKVLAFLASLIGASLPITGFLIWYGRKFKKKPAKKEPVLTGAGNNSEGFKPR
AKIPVKKVEEVF