Protein Info for CA265_RS07795 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 435 transmembrane" amino acids 21 to 39 (19 residues), see Phobius details amino acids 62 to 83 (22 residues), see Phobius details amino acids 93 to 112 (20 residues), see Phobius details amino acids 118 to 137 (20 residues), see Phobius details amino acids 158 to 177 (20 residues), see Phobius details amino acids 192 to 213 (22 residues), see Phobius details amino acids 251 to 272 (22 residues), see Phobius details amino acids 284 to 305 (22 residues), see Phobius details amino acids 312 to 332 (21 residues), see Phobius details amino acids 338 to 356 (19 residues), see Phobius details amino acids 376 to 396 (21 residues), see Phobius details amino acids 402 to 424 (23 residues), see Phobius details PF11700: ATG22" amino acids 6 to 427 (422 residues), 245.6 bits, see alignment E=9.7e-77 PF07690: MFS_1" amino acids 193 to 388 (196 residues), 34.9 bits, see alignment E=8.5e-13 amino acids 252 to 431 (180 residues), 33.7 bits, see alignment E=1.9e-12

Best Hits

KEGG orthology group: K06902, MFS transporter, UMF1 family (inferred from 73% identity to phe:Phep_1904)

Predicted SEED Role

"FIG00909100: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z2V0 at UniProt or InterPro

Protein Sequence (435 amino acids)

>CA265_RS07795 MFS transporter (Pedobacter sp. GW460-11-11-14-LB5)
MIAKNNKKTIRSWAFFDWANSAYNLVITSTIFPAYYTIITTTKEHGDKVEFFGRTYVNTS
LSNYALSFAYLIMAFALPMLSSIADRRGNKKSFMKFFTYVGGAACIGLYFFKLDTLEMSV
ILFALAAMGYIGGVLFSNSYLPEIATEEHQDRVSAQGFSYGYIGSVLLQLICFLFVLKPE
WFGITDASFPPRLSFLLVGVWWIGFSQIPFSALPNGTPQHDKVKTNILKDGFSELSKVWA
QVKEMKVLKGFLVSFFFYSMGVQTIMLAAAGFAEKTLKLGTAKLIAVILIIQLVAIPGAM
LMSYLAKKIGNINVLIMVVVVWVGCCVFGYYITNEYQFYSLAAIVGLIMGGIQSLSRSTY
SKYLPVDTKDSTSFFSFYDVTEKLAIVIGLFSFAYIEDLTGNIRYSIIALASFFIVGLVL
LVLLRKNEHKESLKL