Protein Info for CA265_RS07695 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: tRNA epoxyqueuosine(34) reductase QueG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 311 TIGR00276: epoxyqueuosine reductase" amino acids 12 to 305 (294 residues), 358.5 bits, see alignment E=1.6e-111 PF08331: QueG_DUF1730" amino acids 61 to 134 (74 residues), 86.9 bits, see alignment E=1.8e-28 PF13484: Fer4_16" amino acids 188 to 251 (64 residues), 83.4 bits, see alignment E=4e-27

Best Hits

Swiss-Prot: 71% identical to QUEG_CELAD: Epoxyqueuosine reductase (queG) from Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630)

KEGG orthology group: None (inferred from 72% identity to phe:Phep_1890)

Predicted SEED Role

"Epoxyqueuosine (oQ) reductase QueG"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9ZCB5 at UniProt or InterPro

Protein Sequence (311 amino acids)

>CA265_RS07695 tRNA epoxyqueuosine(34) reductase QueG (Pedobacter sp. GW460-11-11-14-LB5)
MYNNYAKYSQLIKDEALRLGFMACGISKAEFLEEEAPRLENWLNQNRHGEMKYMENYFDK
RLDPRLLVDGAKSVISLSLNYYTEEKQSDPNAPKISKYAYGQDYHTVIKDKLKELTHFIE
ENIGEVSGRAFVDSAPVLDRAWAKKSGIGWIGKNSNLISKTDGSFFFLAELIVDLELDYD
HPYQADYCGSCTRCLDACPTDAIIAPQVVDGTKCISYLTIELKNEIPNEFKDKMSNWMFG
CDICQDVCPWNRFSKAHHEEAFKPAEGLLDLNAKDLTEITDDVFKRVFKGSAVKRTKFTG
LKRNINFLKPE