Protein Info for CA265_RS05685 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 788 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details PF07944: Glyco_hydro_127" amino acids 51 to 430 (380 residues), 408.3 bits, see alignment E=6.3e-126 PF20736: Glyco_hydro127M" amino acids 442 to 532 (91 residues), 84 bits, see alignment E=1.3e-27 PF20620: DUF6805" amino acids 649 to 784 (136 residues), 74.3 bits, see alignment E=2.5e-24

Best Hits

KEGG orthology group: K09955, hypothetical protein (inferred from 51% identity to hhy:Halhy_1248)

Predicted SEED Role

"Putative glycosyl hydrolase of unknown function (DUF1680)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z1R4 at UniProt or InterPro

Protein Sequence (788 amino acids)

>CA265_RS05685 hypothetical protein (Pedobacter sp. GW460-11-11-14-LB5)
MNHHLGKSLLSCALFFALSTNAQNYVPHFNDNRIKVKNTTPIKAYAFDLSQVNLLESTFK
KAMKADEAYLSVIDADRLLSGFRKNAGLTPKAKIYGGWESDGLAGHSLGHYLSAIAMQYA
SSRNPAFLQKANYIVDELVECQKARKNGYLGAFNNEDKIWGELAKGNVKTGGFDLNGGWA
PWYTVHKIMAGLLDAYLYTNNKKALSACVALADWTGTTIGGLNDELLQKMLFCEYGGMAE
TLVNLYAITGEKKYLDLSYKFYDKRILDPLAQQTDILPGKHSNTQIPKIIASARRHEITG
DQRDKTIADFFWKTIVYHHSYVTGGNSNYEYLSEPDKLNDKLTENTTETCNTYNMLKLTG
HLFAENPSAELFDYYEKALYNHILASQNHDDGMTCYFVPLRMGGKKEYSDKFNTFTCCVG
TGMENHVKYNESIYSRGSDGSLYVNLFIPSVLDWKEKGIKITQQTALPQGDQTNLTLSLV
KGSKFSIRVRKPKWSSQTTIAVNGQLQKITPDETGYYVITRIWKNNDKITYTTPEKLYTE
AMPDNADRRAVFYGPVLLAGVLGTTEPDPVKGVPVFVSANNDPKDWLSVVNKQELQFKTK
NIAQPQDVTLVPFYQTKNQYYSVYWDVFTPEKWTVQQKIYDEQKRKQKELEDKTTDVFRF
GEMQPERDHNFSAAKEYMGEDHGSKWRVAGENGFLQFEVKVDPTMQNTIIASYWGMDNRG
RNFDVLVDGVNIATEDLNKYKESRFYDISYKIPVEITKGKNKVTVKLFPKAKNSAGPIYS
VRIIKESL