Protein Info for CA265_RS04145 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: glucose-1-phosphate adenylyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 422 TIGR02091: glucose-1-phosphate adenylyltransferase" amino acids 5 to 388 (384 residues), 448.9 bits, see alignment E=6.9e-139 PF00483: NTP_transferase" amino acids 7 to 270 (264 residues), 220.1 bits, see alignment E=1.9e-69

Best Hits

KEGG orthology group: K00975, glucose-1-phosphate adenylyltransferase [EC: 2.7.7.27] (inferred from 78% identity to phe:Phep_3085)

Predicted SEED Role

"Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)" in subsystem Glycogen metabolism (EC 2.7.7.27)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.27

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z1J6 at UniProt or InterPro

Protein Sequence (422 amino acids)

>CA265_RS04145 glucose-1-phosphate adenylyltransferase (Pedobacter sp. GW460-11-11-14-LB5)
MTDKVLGVILGGGQGSRLSPLTQTRSKPAVPIAGKYRLVDIPISNCLNSGIHRMFVLTQF
NSASLNKHIKNTYHFSHFSTAFVDILAAEQTVQNSGWFQGTADAVRQCMHHIVSHEFDYI
LILSGDQLYQMDFKDMIEKHIEANAEITIATIPVTAKDATDFGILKADDENMITSFIEKP
KTGLEDWISDTGEEMQGEGRNFLASMGIYVFNREYLINILNENEEEKDFGKEILPRAISQ
SRVLSYQYEGYWTDIGNISSFFEANLGLTDEIPKFNMFDSNHAIFTRARMLPPSKISGTT
LDKTIIAEGCIIQASKVEHAVLGIRSRIGKDTVITNAYIMGSDRYQTLEEIQDETSKGHS
LIGIGDRCHINNAIIDKNCRIGNDVKINGGDHLEDGDFELYAVKDGIVVIKKGAVVPSGT
VI