Protein Info for CA265_RS01885 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 324 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF06439: 3keto-disac_hyd" amino acids 154 to 320 (167 residues), 151.4 bits, see alignment E=1.6e-48

Best Hits

KEGG orthology group: None (inferred from 77% identity to phe:Phep_2871)

Predicted SEED Role

"probable large multifunctional protein-putative glycosyl hydrolase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9Z055 at UniProt or InterPro

Protein Sequence (324 amino acids)

>CA265_RS01885 hypothetical protein (Pedobacter sp. GW460-11-11-14-LB5)
MRKEIFSFGISCLLLAAPSLKTSAATVTKTDHLQLAVEPAALIGRWDITVDINGKPAPAW
LEVKLSGYKTLVGYFVSTAGSARPVAEVKFDNGKFRFEIPPQWENGSSNLIIEGTVADAG
IQGTMTNCDGKQYSWKGVKAPYLKRTTAPTWGKPVNLFNGKDLSGWKASGQNQWVVKNGI
LTSPKAGSNLVTEEKYNDFKLHVEFKYAKGGNSGVYLRGRYEVQIEDSKKDAHPNSVLFG
GIYGFLTANEMVTLGPGEWQSYDITLVGRLVTVVANGKTIISNQEIPGITGGALDSNEGE
PGPIYLQGDHEPIEYRKIVITPAK