Protein Info for CA265_RS00615 in Pedobacter sp. GW460-11-11-14-LB5

Annotation: copper oxidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 763 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details transmembrane" amino acids 680 to 699 (20 residues), see Phobius details PF07732: Cu-oxidase_3" amino acids 61 to 171 (111 residues), 128.5 bits, see alignment E=2.1e-41 PF00394: Cu-oxidase" amino acids 243 to 331 (89 residues), 55.2 bits, see alignment E=1.4e-18 PF07731: Cu-oxidase_2" amino acids 447 to 561 (115 residues), 98.4 bits, see alignment E=4.7e-32

Best Hits

KEGG orthology group: None (inferred from 69% identity to fjo:Fjoh_0192)

Predicted SEED Role

"Multicopper oxidase" in subsystem Copper homeostasis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YZ83 at UniProt or InterPro

Protein Sequence (763 amino acids)

>CA265_RS00615 copper oxidase (Pedobacter sp. GW460-11-11-14-LB5)
MKFILVCCLSILLSSFAFGQHQHNEVKAAAPKKNPQKTSDIETVGNNKLPGVVRYDLYIA
DTTVTFGGKAKRAIAVNGQIPMPTLTFTEGDTAEIHVHNRLKESTSLHWHGLFLPNQYDG
VPYLTQMPIEPNKTHVYRFPIIQNGTHWYHSHSGLQEQIGMYGAMILNKRKEPAIPTVPV
VLSEWSNMMPHEVDRRLHNANDWFAIKKGTTQSYAEAIKSGHFKTKLTNELKRMTAMDVS
DVYYEAFLVNGKNQYQVPNNLKAGDKVRLRIANGGASTYFWLTYAGGKITVVANDGNDVT
PVEVDRLIIAVSETYDVIVTVPENKSYEFLVTPEDRTKSASLWLGSGQKVPAQKLPKLKY
FEGMKMMNEMMDMNGNLVQMDGMKMQNQVMDMNTVMYAELDDAGRDTVVSDAHQGHDMGN
DKGMKGPITTLNYDMLRSPEKTTLPKAPTRQMEFQLTGNMNRYVWTLDNKTISEEDKILI
KKGENLRIILYNNSMMRHPMHLHGHDFRVINGQGDYAPLKNVLDIMPMERDTIEFSASES
GDWFFHCHILYHMMSGMGKIFSYENSPLNPEIPYPKLAQRKLYADDRMFHFMAENDFASN
GNDGMAMLANTRWSFGTEWRLGYNKMHGFETETHIGRYVDRMQWLMPFVGFDWRYRKMEA
GEQESNIFGQKSTKDKRTMFSVGLAYTLPMLIIAQAEVYHDGNVRLQLMREDIPISKRLR
ASFMVNSDKEFMGGLKFITTKYMGISAHYDSDMGFGAGLTLNY