Protein Info for BWI76_RS27305 in Klebsiella michiganensis M5al

Annotation: glycosyl transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 364 PF13579: Glyco_trans_4_4" amino acids 13 to 178 (166 residues), 30.5 bits, see alignment E=8.6e-11 PF13439: Glyco_transf_4" amino acids 13 to 182 (170 residues), 51.1 bits, see alignment E=3.4e-17 PF00534: Glycos_transf_1" amino acids 195 to 338 (144 residues), 79.1 bits, see alignment E=5.9e-26 PF13692: Glyco_trans_1_4" amino acids 200 to 335 (136 residues), 70.8 bits, see alignment E=3e-23

Best Hits

KEGG orthology group: None (inferred from 90% identity to eae:EAE_06350)

Predicted SEED Role

"Lipopolysaccharide core biosynthesis glycosyl transferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285BBU0 at UniProt or InterPro

Protein Sequence (364 amino acids)

>BWI76_RS27305 glycosyl transferase (Klebsiella michiganensis M5al)
MRILFVIDGLPGGGAEKVVLTLAEHFLSQGEQVSLFSLRDICEYPLPAGLDYQVIADRCR
KPWRKLTELSRRARQLDTAIEKAEQQGRFELVLSNLHKTDRIVSRSRLLNGRNVWFCLHG
VFSTSYLGHRSGFDRWMKKQKIGRVYQGRNVVTVSDAVGQDLVEQFAIRPAQLKTIYNPF
DIAALRAAAEEPSQRPDGDYIIHVGRFHPGKRHDRLIEAYAQSGIDAPLVLLGQGKPEQE
QRLRQLAQQLQVADRVLFKGFQKNPLPWIKGARMLVLSSDSEGFGNVVVEALLLDTPVAS
TRCPGGVTEILTGELSRGLADLNSPALAQTMQSIYHSPPAIDAAALEKFSVASICQQYRQ
LRSA