Protein Info for BWI76_RS17840 in Klebsiella michiganensis M5al

Annotation: sugar ABC transporter permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 313 transmembrane" amino acids 31 to 53 (23 residues), see Phobius details amino acids 94 to 115 (22 residues), see Phobius details amino acids 127 to 147 (21 residues), see Phobius details amino acids 180 to 204 (25 residues), see Phobius details amino acids 225 to 244 (20 residues), see Phobius details amino acids 283 to 306 (24 residues), see Phobius details PF00528: BPD_transp_1" amino acids 114 to 311 (198 residues), 42.3 bits, see alignment E=3.5e-15

Best Hits

KEGG orthology group: K02025, multiple sugar transport system permease protein (inferred from 98% identity to kva:Kvar_1859)

Predicted SEED Role

"ABC type sugar transport system, permease protein precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B5E7 at UniProt or InterPro

Protein Sequence (313 amino acids)

>BWI76_RS17840 sugar ABC transporter permease (Klebsiella michiganensis M5al)
MTLHETKSSPIKQAASPDSAGWLSAKRKRALIPWLFLAPALIIFSWFKFIPMIQGLVMSF
YKVNFNQPNEWVGLDNFTRAFADAELHAAVVNTLLYVVVTMFAAAILAFFLAMLLEGPAR
HLRFIRTAIFLPAVTSAAIVAEMWRILFNPTPNGVVNHILSWFGVADQGFLASSDQALGV
IMLLHIWKAVPYNMVIFIAGLAGISRDLYDAANVDGASWWNRLRYVTLPGMIPALSVVLM
LSFIRGFRVFAEVYATTGGGPSNATEMVMTHIYKLGFEQFDYGYASAVSFLLFTFTVLLT
ICHLTLKKRIARY