Protein Info for BWI76_RS12910 in Klebsiella michiganensis M5al

Annotation: 3,4-dihydroxyphenylacetate 2,3-dioxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 268 PF00903: Glyoxalase" amino acids 20 to 123 (104 residues), 35.2 bits, see alignment E=7.2e-13

Best Hits

Predicted SEED Role

"Catechol 2,3-dioxygenase (EC 1.13.11.2)" in subsystem Central meta-cleavage pathway of aromatic compound degradation (EC 1.13.11.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.13.11.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (268 amino acids)

>BWI76_RS12910 3,4-dihydroxyphenylacetate 2,3-dioxygenase (Klebsiella michiganensis M5al)
MTIENVIATVPAPDILRCAYMEIQVTDLRAAREFYVDILGLTVTAEDDQHIYLRSIEEFI
HHNLVLRQGPIAAMTAFSFRMRSREDVDRAEAWFRARGCRKEGFTRGIGDSVRVEDPLGF
PHEFFHDVQNVERLTWRYDLHTPGALRKSDLIERGPGRHGVSNAFYLYLRDPDGHRIEIY
TQDYYTGDPDNPVMSWDVDDNQRRDWWGNPVAASWYTEGSLVLDLDGNPQPVTERSEPSE
MAVTIGADGFSYTRKDDVLEGFRLGNSL