Protein Info for BWI76_RS12680 in Klebsiella michiganensis M5al

Annotation: oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 355 PF01408: GFO_IDH_MocA" amino acids 7 to 124 (118 residues), 98.5 bits, see alignment E=1.1e-31 PF03807: F420_oxidored" amino acids 9 to 94 (86 residues), 22.4 bits, see alignment E=3.9e-08 PF03447: NAD_binding_3" amino acids 13 to 118 (106 residues), 39.1 bits, see alignment E=2.8e-13 PF02894: GFO_IDH_MocA_C" amino acids 136 to 341 (206 residues), 132.2 bits, see alignment E=6.5e-42

Best Hits

KEGG orthology group: None (inferred from 86% identity to esc:Entcl_2645)

Predicted SEED Role

"Nucleoside-diphosphate-sugar epimerases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B334 at UniProt or InterPro

Protein Sequence (355 amino acids)

>BWI76_RS12680 oxidoreductase (Klebsiella michiganensis M5al)
MTNGKNINIALIGYGFVGKTFHAPLLQSVDGLNLAIVASRDEEKVKRDLPNVTVIASPEE
AIQHPDIDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAQEKQRVL
SVFHNRRWDSDYLAVKQVIEQGLIGNVKHFESHFDRFRPEVRVRWREQNVPGSGLWFDLG
PHLIDQALQLFGLPQSVQGNIATLREGAEINDWAHVVLNYPQHKVILHCSMLVAGGVSRF
TVHGDKGSAVKQRADQQESQLLAGVVPGSESWGADDDSLVVFDADLRASEISAPRGDQRQ
YYIHVRDALTGKINNPVSPLEALAVMAVLEAAAQSAESGTTQTLALTADELAGLQ