Protein Info for BWI76_RS09895 in Klebsiella michiganensis M5al

Annotation: aliphatic sulfonates ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 257 PF00005: ABC_tran" amino acids 27 to 160 (134 residues), 105.3 bits, see alignment E=2.2e-34

Best Hits

Swiss-Prot: 85% identical to SSUB_ECOK1: Aliphatic sulfonates import ATP-binding protein SsuB (ssuB) from Escherichia coli O1:K1 / APEC

KEGG orthology group: None (inferred from 90% identity to eae:EAE_15265)

MetaCyc: 86% identical to aliphatic sulfonate ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-56-RXN [EC: 7.6.2.14]

Predicted SEED Role

"Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB" in subsystem Alkanesulfonate assimilation or Alkanesulfonates Utilization

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.6.2.14

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285B1H9 at UniProt or InterPro

Protein Sequence (257 amino acids)

>BWI76_RS09895 aliphatic sulfonates ABC transporter ATP-binding protein (Klebsiella michiganensis M5al)
MTTARLNPGIPLLLNGVSKRYGSKTILNELDLHIPTGQFVAVVGRSGGGKSTLLRLLAGL
EKPNAGQLLAGSTPLAQIQDDTRMMFQDSRLLPWKTVIDNVGLGLKGQWREAALRALASV
GLEDRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQ
EHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLLVDIPRPRRTGSAKLGELEAEVLNR
VMQRGQNESAPRLARHG