Protein Info for BWI76_RS02805 in Klebsiella michiganensis M5al

Annotation: sugar ABC transporter permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 341 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 59 to 79 (21 residues), see Phobius details amino acids 84 to 103 (20 residues), see Phobius details amino acids 109 to 131 (23 residues), see Phobius details amino acids 137 to 157 (21 residues), see Phobius details amino acids 172 to 195 (24 residues), see Phobius details amino acids 224 to 246 (23 residues), see Phobius details amino acids 257 to 275 (19 residues), see Phobius details amino acids 282 to 304 (23 residues), see Phobius details amino acids 311 to 331 (21 residues), see Phobius details PF02653: BPD_transp_2" amino acids 57 to 321 (265 residues), 176.9 bits, see alignment E=2.4e-56

Best Hits

Swiss-Prot: 88% identical to YTFT_ECOLI: Inner membrane ABC transporter permease protein YtfT (ytfT) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 94% identity to eae:EAE_09570)

MetaCyc: 88% identical to galactofuranose ABC transporter putative membrane subunit YtfT (Escherichia coli K-12 substr. MG1655)
TRANS-RXN0-491 [EC: 7.5.2.9]; 7.5.2.9 [EC: 7.5.2.9]

Predicted SEED Role

"Putative sugar ABC transport system, permease protein YtfT"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.5.2.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AWS6 at UniProt or InterPro

Protein Sequence (341 amino acids)

>BWI76_RS02805 sugar ABC transporter permease (Klebsiella michiganensis M5al)
MMPQSVPKSGQPKRRFNWPKGMPQIIALLLVLVVDSLVAPHFYQVVLQDGRLFGSPIDIL
NRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATAASMTVAGHSLPIVLLASLGAGAL
AGLWNGILVAVLKIQPFVATLILMVAGRGVAQLITSGQIVTFDSPHLAWLGSGSLLLFPT
PVIIAIVTLALFWLFTRKTALGMFIEAVGINIRAAKNAGVNTRVVVMLAYVLSGVCAAIA
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGIL
LSGFPPELNQVVKAVVVLCVLIVQSPRFISILKGMRGHDKT