Protein Info for BWI76_RS02800 in Klebsiella michiganensis M5al

Annotation: ABC transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 PF00005: ABC_tran" amino acids 25 to 174 (150 residues), 125.1 bits, see alignment E=5e-40 amino acids 279 to 430 (152 residues), 73.3 bits, see alignment E=4.9e-24

Best Hits

Swiss-Prot: 93% identical to YTFR_ECOLI: Uncharacterized ABC transporter ATP-binding protein YtfR (ytfR) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 96% identity to eae:EAE_09565)

MetaCyc: 93% identical to galactofuranose ABC transporter putative ATP binding subunit (Escherichia coli K-12 substr. MG1655)
TRANS-RXN0-491 [EC: 7.5.2.9]; 7.5.2.9 [EC: 7.5.2.9]

Predicted SEED Role

"Putative sugar ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)" (EC 3.6.3.17)

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.17

Use Curated BLAST to search for 3.6.3.17 or 7.5.2.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AWY8 at UniProt or InterPro

Protein Sequence (500 amino acids)

>BWI76_RS02800 ABC transporter (Klebsiella michiganensis M5al)
MNGEQHQEILRTEGLSKFFPGVKALDNVNFSLRRGEIMALLGENGAGKSTLIKALTGVYH
ADRGAIWLEGREISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPRRFGLLQRK
EMEKRATALMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQE
VEMLFTLMRQLRDSGVSLIFVTHFLDQVYAVSDRITVLRNGGFVGCRETRELPQIELVKM
MLGRELEHNALQRAGRTLLSDKPVAAFEDFGKKGTIAPFNLQVRPGEIVGLAGLLGSGRT
ETAEVIFGIKPADSGKAWIKGKPQTLRSPHQASCLGIGFCPEDRKTDGIIAAASVRENIV
LALQAQRGWLRPISRREQNEIAERFIRQLGIRTPSAEQPIEFLSGGNQQKVLLSRWLLTK
PQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRQQ
VAELALSELSVPAIMNAIAA