Protein Info for BWI76_RS02780 in Klebsiella michiganensis M5al

Annotation: translocation and assembly module TamB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1258 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF04357: TamB" amino acids 922 to 1258 (337 residues), 251.6 bits, see alignment E=7.7e-79

Best Hits

Swiss-Prot: 83% identical to TAMB_CITRI: Translocation and assembly module subunit TamB (tamB) from Citrobacter rodentium (strain ICC168)

KEGG orthology group: None (inferred from 94% identity to eae:EAE_09545)

Predicted SEED Role

"Uncharacterized protein YtfN"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A285AWS1 at UniProt or InterPro

Protein Sequence (1258 amino acids)

>BWI76_RS02780 translocation and assembly module TamB (Klebsiella michiganensis M5al)
MSLWKKISLGVLIFLVLLLGTVGFLVGTTTGLHLVIKAADRWVPGLEIGKATGGWRDLTL
ENVRFEQPGVAVTAGQFHLGVKLRCLWDSSLCVNDLSLRDIYVAIDTSKMPPAAPVEEED
SGPLNLSTPYPITLSRVALHNVNVKIDDTAVSLRDFTSGLNWQEKNLTLTPTSLQGLLIA
LPKVAKVAQEQVVEPKIDNPQPEEKPLGETMKDLFSTPVLPEMTDVHLPLNLNIQAFRGE
QLRLTGDTDITIYNLLLKVSSIDGQMKLDALDVDSDQGKVTASGNAQLQDNWPVDITLNS
TLNIDPLKGEKVQLKVGGEVRKKLTLGVDLNGPVTMTLRAETQLAEAGLPLDMEIKSKQL
YWPFTGEKAYQADDLLLKFNGKMTDYTLAFSTAVKGQSLPPAKINLDAKGNEQQVNLDKL
TVAALEGKTELKALLDWQQAISWRGELTLNGINTAKEVPDWPSKLNGLIKTQGSLYGGSW
QMSVPELKITGNVKQNKVDVSGSLQGNSYMQWKIPGLHLALGPNSADVKGELGVKDLNLD
ATIDAPHLDNALPGLGGTAKGLVKVRGTVDAPQLLADITARALRWQELSVAQVNVKGDVK
STDQIGGSLDVRVDRISQPGVNISLVQLNAKGNEKQHDLQLRVQGDPVSGQLSLAGSFDR
KAERWRGTLSNTRFQTPVGPVALTRNIALDYRNLEQKISIGPHCWTNPNAELCVPQTIDA
GASGRAVVNLNRFDLAMLKPFMPEATQASGVFSGNADVSWDTTKEGLPQGKVTLNGRNVK
VTQTVNDAPLPVAFDTLNLTADLHNNRAQLGWLIRLTNNGQLDGQVQVTDPQGRRNLGGN
VNINNFSLAMINPIFSRGEKAEGRLNARLTLGGNLQSPQLFGQMQLNGVDIDGNFMPFDM
QPSQLAMNFTGTRSTLQGTVNTSQGHIALSGNADWTQIDNWRAQIAAKGSRVRITVPPMV
RLDVSPDVVFTATPSLFNLDGSVDVPWARIVVNEVPESAVGVSSDEVMLDKNLQPIKQQS
AGIPINSNLTIHVGNNVRLDAFGLKARLTGDLKVAQDKQGLGLNGQINIPEGRFHAYGQD
LIVRKGELLFSGPPDQPLLNIEAIRNPDATEDDVIAGVRVTGSADQPKAEIFSDPAMSQQ
EALSYLLRGQGLGSGQSDSAAMTSMLIGMGVAQSGQVVGKIGETFGVSNLALDTEGVGDS
SQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMPKLYMEAVSGVDQALDLLYQFEF