Protein Info for BPHYT_RS35140 in Burkholderia phytofirmans PsJN

Annotation: plasmid partitioning protein ParA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 259 PF00480: ROK" amino acids 9 to 149 (141 residues), 59.8 bits, see alignment E=1.6e-20

Best Hits

KEGG orthology group: K00886, polyphosphate glucokinase [EC: 2.7.1.63] (inferred from 100% identity to bpy:Bphyt_7098)

Predicted SEED Role

"Polyphosphate glucokinase (EC 2.7.1.63)" in subsystem Entner-Doudoroff Pathway or Glycolysis and Gluconeogenesis (EC 2.7.1.63)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.63

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2TA84 at UniProt or InterPro

Protein Sequence (259 amino acids)

>BPHYT_RS35140 plasmid partitioning protein ParA (Burkholderia phytofirmans PsJN)
MTSSTERILAIDVGGTGLKAAIIDADGNMKTERLRVATPHPCTPDQLVDALAKLVAPLVE
QDPPTLMSIGFPGVVRNNRILTAPHFGVEGWHDIPLADSLAQRLGGLPVRMINDAEMQGF
AAIEGQGLEFVLTLGTGAGTAMFRDGELMPHLELAHHPVSKKGVAYDEYIGDAAREKAGN
KRWNRRVEKVIGILSTLVNYDKLWIGGGNAARLKFDLPANVATVSNDAGIEGGARLWHPR
SVRETRQLPEANERTGRFK