Protein Info for BPHYT_RS32140 in Burkholderia phytofirmans PsJN

Annotation: DNA replication protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF08707: PriCT_2
  • amino acids 13 to 83 (71 residues), 64.7 bits, E=8.2e-22

Best Hits

KEGG orthology group: K06919, putative DNA primase/helicase (inferred from 100% identity to bpy:Bphyt_6494)

Predicted SEED Role

"DNA primase TraC (EC 2.7.7.-)" in subsystem DNA-replication (EC 2.7.7.-)

KEGG Metabolic Maps

• Biosynthesis of siderophore group nonribosomal peptides
• Lipopolysaccharide biosynthesis
• Nucleotide sugars metabolism

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.-

Use Curated BLAST to search for 2.7.7.-

Sequence Analysis Tools

See B2T8Y7 at UniProt or InterPro

Protein Sequence (621 amino acids)

>BPHYT_RS32140 DNA replication protein (Burkholderia phytofirmans PsJN)
MSMPQTDETARVRAALALIPAEDYGTWVDMAFALKHGLGDAGFEIWDEWSRTAGNYDERA
ARTTWCSVKESGGKTLASLFWLAREHGFDLRRGHYPDRLATALVPSPDVLERRNREAARQ
QARHAAAAREAQEIWQWARPVGPAHPYLVRKGLDSVPALRELEAPELRALLGYAPASEGR
PLSGRVLVVPVWIDRAISTLELIDEAGNKSSLAGGVKKGGYWMAGAAPVADGQATPILIG
EGMATMLSAHCATGWVALAALSSGNLPPVAESLRKQFPDADIVVLGELGPGEIKSRQAAD
ASRARMVLPVFAADARIDDKAPSDFNDMAVLSGFARVGEHLGEVVGRDVMPVVERTGLPA
GMVNGRSNGRESDEPMEDMMGNVKEKIVNAVDDTPRRRTLKRGAPKPTTPSEAPEPVMTS
AEAQPTGDRSTAGPAGDTPAAEPRRFAPTRPPVGEPLFAVAEVPSEVRALAEHRFGSPLR
MGTPRENGGPYRGEVFNTEHYLIQEVATRSVVFHPKTQMEFVSERLRWMDENARLNGSEL
QVGYEGDRPRVYPWDRARDLLDRTVGSLKKSARELNFSPNLDGMLDQLQARSWARIREAR
TAALEQSKERSVSQDPPGPDR