Protein Info for BPHYT_RS23390 in Burkholderia phytofirmans PsJN

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 336 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 88 to 105 (18 residues), see Phobius details amino acids 112 to 133 (22 residues), see Phobius details amino acids 155 to 178 (24 residues), see Phobius details amino acids 186 to 207 (22 residues), see Phobius details amino acids 226 to 244 (19 residues), see Phobius details amino acids 257 to 281 (25 residues), see Phobius details amino acids 301 to 324 (24 residues), see Phobius details PF14897: EpsG" amino acids 12 to 322 (311 residues), 55.7 bits, see alignment E=2.4e-19

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_4713)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2TDN9 at UniProt or InterPro

Protein Sequence (336 amino acids)

>BPHYT_RS23390 hypothetical protein (Burkholderia phytofirmans PsJN)
YRWLRPSMLGFLALSAFILLKIALGDRSALLDQDNYVAYFRDADPLWIVHLWSSSQSVVL
FIVKTITDELGWRLWVLGLDSLGLSPDTAVRVTVVVLNVLMALALSRTRRPLLGLLLWAL
IPTGLATVGLFQIRQGFALSIAMYFAMCRQQPVRGALLASIVHTTFAYPALFLILAHFLM
RRSKALAIVGVVGAALAMSLASAWLFARFGGRRIEEYTQQEEFTVNFLISLALYLIVPIL
VIVMRRKHIEYVAREMVVHEVAIMHIGLIMFLIISFFVYPFGTQRIVYYGPLLLAFMLPE
IRIKNSLVLWIVAFILAILTYDIHKNYLLDTYKYFL