Protein Info for BPHYT_RS22725 in Burkholderia phytofirmans PsJN

Annotation: glycosyl transferase family 51

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1026 signal peptide" amino acids 1 to 38 (38 residues), see Phobius details PF00912: Transgly" amino acids 155 to 339 (185 residues), 65.4 bits, see alignment E=4.6e-22

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_4577)

Predicted SEED Role

"Membrane carboxypeptidase (penicillin-binding protein)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2TD36 at UniProt or InterPro

Protein Sequence (1026 amino acids)

>BPHYT_RS22725 glycosyl transferase family 51 (Burkholderia phytofirmans PsJN)
MNRPLVRLPFRATGVASVRKWFKWALVAAFLLALALAARFCQNEIETSRLQAHYLSELTR
DVGFSVADGPSHSIRFPEADKGPYDSRLGYALLPSIQQRLLQRGFEITAQARDSERMLSL
ADNGLFLPYEEKDRAGLQLFDGTGAPLFAAQFPGRVYDDFDAIPPLVVNSLLFIEDRYLL
DPNQPNRNPAIDWGRFSRALADQGVRVFNHHQSQPGGSTLATQIEKFRHSAGGRTATPPE
KLRQIASASVRAYLNGPQTMPARQQIVVHYLNSVPLAAQPGIGEINGIGDGLAAWYGRDF
NDVNRVLIAPSTEQNLPEQGIAFRQVLSLMIAQRAPSYFLHHGYKELERLTDSYLRLLAN
GGIVSVPLRDAALSAVVDLQRAPVKTASADSFVSRKAVTSMRSHLLAALNIPSFYELDRL
DLQANGTLNNAVQQAVSDRLAAAATRDGAKAAGLVGFEMLRASDDPSRIAYSFTLFERRD
GANLVRVQTDSVNQPFDINSGARLNLGSTAKLRTVVTYLQIVSDLHKRYAPLSTAELKAV
KYDPNDQLTRWSLDYFAHTSDRSLQAMLDAAVERKYSASPGETFYTGGGAQTFNNFESDD
NSRILTVHRAFQHSVNLVFVRLMRDIVHYEMVQTTGPSAQWLGDPEMRKMYLTRFADQES
RVYMNRFYTKYHGKTPDQALSLLLLGVRKSPPKVATVLRSVAPDESNAWFNLKMRAALKN
TPAASVLDDEDLANLYAKYAIDRFNLNDRGYISSVHPLELWTLNYLREHPDATLEQIQSA
SREVRLSTYSWLFKTRYHATQDRRIKRMVELRAYDAIGKSWQALGYPFATLTPSYAAAIG
ASGDRPAALAQLIGVVANNGNKVPTESLTQLDFAKDTPYETHFKRAAVAPEPQLSPEIAS
TVKVLLRDVVTGGTAKRLAQGMTFPDGQTLEVYGKTGTGDQRFNVFAKGARLIESRKVNR
SATFVFAMGDRFYGTLTAWVHEPYAAHYEFTSALSVQLLKSLAPVLQPLLNETPVKTASV
TKVAAQ