Protein Info for BPHYT_RS22570 in Burkholderia phytofirmans PsJN

Annotation: acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 179 transmembrane" amino acids 65 to 84 (20 residues), see Phobius details PF13302: Acetyltransf_3" amino acids 9 to 153 (145 residues), 39.5 bits, see alignment E=2.7e-13 PF00583: Acetyltransf_1" amino acids 62 to 152 (91 residues), 61.4 bits, see alignment E=3e-20 PF13673: Acetyltransf_10" amino acids 65 to 156 (92 residues), 43.4 bits, see alignment E=1e-14 PF13420: Acetyltransf_4" amino acids 76 to 170 (95 residues), 27.4 bits, see alignment E=9.4e-10 PF13508: Acetyltransf_7" amino acids 78 to 153 (76 residues), 49.9 bits, see alignment E=1.1e-16 PF08445: FR47" amino acids 94 to 155 (62 residues), 34.6 bits, see alignment E=4.6e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_4546)

Predicted SEED Role

"Histone acetyltransferase HPA2 and related acetyltransferases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2TE04 at UniProt or InterPro

Protein Sequence (179 amino acids)

>BPHYT_RS22570 acetyltransferase (Burkholderia phytofirmans PsJN)
MHLNDNAVLVRQLGPDDRHDYFQLRLRGLKAHPDSFGQSYEEALAKGPSQHDALLKGSHA
AQGDFLLGAYASAGSPLIGVVGLIRNPGDKQRHKAALIGMYVAPEAAGRGVGRALLNELL
ARASRVEGLRQIQLHVGSRNEAARKLYESLGFRKFGCEVGALNVGGVFHDADLMALFIQ