Protein Info for BPHYT_RS17765 in Burkholderia phytofirmans PsJN
Annotation: toluene ABC transporter ATP-binding protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 59% identical to MLAF_HAEIN: Intermembrane phospholipid transport system ATP-binding protein MlaF (mlaF) from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
KEGG orthology group: K02065, putative ABC transport system ATP-binding protein (inferred from 100% identity to bpy:Bphyt_3571)Predicted SEED Role
"Methionine ABC transporter ATP-binding protein" in subsystem Methionine Biosynthesis or Methionine Degradation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See B2T6X8 at UniProt or InterPro
Protein Sequence (273 amino acids)
>BPHYT_RS17765 toluene ABC transporter ATP-binding protein (Burkholderia phytofirmans PsJN) MSSSPETLLELRDVDFGYGDRLVLSNLNLRFKRGQVVAVMGGSGCGKTTVLRLIGGLVRA QRGQILFQGQDIGRQTRDGLYALRRKMGMLFQFGALFTDMSVFENVAFALREHTDLPEEL IRDLVLMKLNAVGLRGARDLAPSEISGGMARRVALARAIALDPELMMYDEPFAGLDPISL GITANLIRALNQALGATSILVTHDVPESFAIADYVYFLANGGVHAEGTPAELRASTDPTV RQFIDGAPDGPFKFHYPSKTPLAADFGIGGGQS