Protein Info for BPHYT_RS16750 in Burkholderia phytofirmans PsJN

Annotation: adhesin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 500 1000 1500 2000 2500 3000 3635 PF13018: ESPR" amino acids 1 to 47 (47 residues), 55.3 bits, see alignment (E = 4.3e-18) PF05658: YadA_head" amino acids 202 to 226 (25 residues), 15.9 bits, see alignment (E = 8e-06) amino acids 250 to 271 (22 residues), 10 bits, see alignment (E = 0.00056) amino acids 302 to 327 (26 residues), 19 bits, see alignment (E = 8.8e-07) amino acids 329 to 354 (26 residues), 19.5 bits, see alignment (E = 5.9e-07) amino acids 343 to 369 (27 residues), 14 bits, see alignment (E = 3.2e-05) amino acids 487 to 513 (27 residues), 12.8 bits, see alignment (E = 7.5e-05) amino acids 521 to 545 (25 residues), 14 bits, see alignment (E = 3.2e-05) amino acids 580 to 599 (20 residues), 17.6 bits, see alignment (E = 2.4e-06) amino acids 587 to 612 (26 residues), 25.4 bits, see alignment (E = 8.6e-09) amino acids 615 to 641 (27 residues), 29.5 bits, see alignment (E = 4.3e-10) amino acids 758 to 784 (27 residues), 31.4 bits, see alignment (E = 1.1e-10) amino acids 914 to 940 (27 residues), 13.5 bits, see alignment (E = 4.7e-05) amino acids 994 to 1020 (27 residues), 10.5 bits, see alignment (E = 0.00041) amino acids 1166 to 1192 (27 residues), 31.4 bits, see alignment (E = 1.1e-10) amino acids 1308 to 1334 (27 residues), 27 bits, see alignment (E = 2.6e-09) amino acids 1452 to 1478 (27 residues), 27 bits, see alignment (E = 2.6e-09) amino acids 1596 to 1622 (27 residues), 31.4 bits, see alignment (E = 1.1e-10) amino acids 1731 to 1757 (27 residues), 27 bits, see alignment (E = 2.6e-09) amino acids 1875 to 1901 (27 residues), 27 bits, see alignment (E = 2.6e-09) amino acids 2011 to 2037 (27 residues), 27 bits, see alignment (E = 2.6e-09) amino acids 2155 to 2181 (27 residues), 27 bits, see alignment (E = 2.6e-09) amino acids 2292 to 2318 (27 residues), 27 bits, see alignment (E = 2.6e-09) amino acids 2436 to 2462 (27 residues), 25.4 bits, see alignment (E = 8.6e-09) amino acids 2580 to 2606 (27 residues), 27 bits, see alignment (E = 2.6e-09) amino acids 2717 to 2743 (27 residues), 24.3 bits, see alignment (E = 1.9e-08) amino acids 2860 to 2886 (27 residues), 27 bits, see alignment (E = 2.6e-09) amino acids 3004 to 3030 (27 residues), 26.8 bits, see alignment (E = 3.2e-09) amino acids 3305 to 3331 (27 residues), 24.7 bits, see alignment (E = 1.4e-08) amino acids 3461 to 3487 (27 residues), 32.9 bits, see alignment (E = 3.8e-11) amino acids 3476 to 3499 (24 residues), 17.5 bits, see alignment (E = 2.6e-06) PF05662: YadA_stalk" amino acids 409 to 450 (42 residues), 37.5 bits, see alignment (E = 1.5e-12) amino acids 680 to 721 (42 residues), 39.6 bits, see alignment (E = 3.5e-13) amino acids 823 to 863 (41 residues), 40.5 bits, see alignment (E = 1.8e-13) amino acids 1088 to 1129 (42 residues), 37.7 bits, see alignment (E = 1.3e-12) amino acids 1231 to 1272 (42 residues), 38.9 bits, see alignment (E = 5.8e-13) amino acids 1374 to 1415 (42 residues), 39.6 bits, see alignment (E = 3.5e-13) amino acids 1518 to 1559 (42 residues), 39.6 bits, see alignment (E = 3.5e-13) amino acids 1661 to 1702 (42 residues), 40.7 bits, see alignment (E = 1.6e-13) amino acids 1797 to 1838 (42 residues), 36.8 bits, see alignment (E = 2.5e-12) amino acids 1941 to 1982 (42 residues), 39.8 bits, see alignment (E = 2.9e-13) amino acids 2077 to 2118 (42 residues), 36.8 bits, see alignment (E = 2.5e-12) amino acids 2221 to 2262 (42 residues), 39.5 bits, see alignment (E = 3.7e-13) amino acids 2358 to 2399 (42 residues), 32.8 bits, see alignment (E = 4.5e-11) amino acids 2502 to 2543 (42 residues), 37.7 bits, see alignment (E = 1.3e-12) amino acids 2646 to 2687 (42 residues), 39.5 bits, see alignment (E = 3.7e-13) amino acids 2782 to 2823 (42 residues), 38.4 bits, see alignment (E = 8e-13) amino acids 2928 to 2967 (40 residues), 32.2 bits, see alignment (E = 6.9e-11) amino acids 3069 to 3108 (40 residues), 39.3 bits, see alignment (E = 4.3e-13) amino acids 3198 to 3238 (41 residues), 23.6 bits, see alignment (E = 3.4e-08) amino acids 3349 to 3383 (35 residues), 36.8 bits, see alignment (E = 2.5e-12) amino acids 3410 to 3445 (36 residues), 32.2 bits, see alignment (E = 7e-11) amino acids 3505 to 3534 (30 residues), 36.9 bits, see alignment (E = 2.4e-12) PF03895: YadA_anchor" amino acids 3577 to 3635 (59 residues), 69.9 bits, see alignment (E = 9.6e-23)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2SYM9 at UniProt or InterPro

Protein Sequence (3635 amino acids)

>BPHYT_RS16750 adhesin (Burkholderia phytofirmans PsJN)
MNKSYKSVWNETTGTYVAASETAKARGKKTSSGKALAMALVAGATALQAHAGALDGGTVN
TGTGQIAYGTGAITGNATSPGGSYDTAIGYNSVVDTATGTAMSSGNTAVGGFSNINGAKN
SVAIGYNASINGGSLANSIDLIAIGANSSASYGTSIAIGGNAHATPASNGSTGATGYAIA
IGENSLVSQAGGVAIGGASTVTGTSSIAMGTTAQALGNYSQAMGNLAVASGVGDIALGAS
TTASGAGTWATALGTQASATGTGSAAVGGGALASGNYGEAMGYSATASGANSTGVGYLAN
VSGANSVALGYLSTATADFSQALGGRALASGIRSVALGDAATASAASATAIGQAASATTA
NSVALGASSVANSATLATAGFTPAGGSAISAATAVGGEVSVGAAGKERRITNVAAGLNAT
DAVNVSQLQSEDAKVNTVNNNVNNLSNNVTNIAGNVTNISNTVNNITNGGNGIKYFHTNS
TLADSSAVGVNSVAIGPLATTAMANDIAMGLNATTGAGAGNGAGAIAIGANSTAYGGNSV
AYGANVAIGSSAVAGNSGATSSQALALGASATATNWSTDAIGAWSTASGNYSSALGSQAR
ATGDQATAVGAFTSATGTNSTAVGQGASASTNNSVALGYKSVANSATLGTAGFTPVGGTA
ISAATAAGEVSMGTSGGERRITNVAAGLNATDAVNVSQLQSEDAKVNNVSNNVSNLSNNV
SNIAGNVTNISNTVNNITNGGNGIKYFHTNSTLADSSATGTDAVAIGGNAKATAANSVAL
GSNSTTTANLSAAGYNPGTAALSGTASAANGEVSVGSAGKERRITNVAAGSAATDAVNVS
QLQSEDAKVTNVSNILSNITNGGGIRYFHANSTLADSSATGTDSIAVGPAAASGNAGDIA
IGVGASAETNAAMASSGNSIAIGTGATTNLGNSIAMGTGAQAGNHGMSNGQGIAIGQGAY
AVTVAGAWGQNTALGFNATSSNYDALAVGTGALATAAHASAVGGFSTATGFNSLAIGSYS
MANAGSAVAVGNGAIAAAANSVALGASSVANSTTLATAGFAPAGGTAISAATAAGGEVSV
GSAGAERRITNVAAGLNTTDAVNVSQLQSEDAKVNNVSNNVSNLSNNVSNIAGNVTNISN
TVNNITNGGTGIKYFHTNSTLADSSATGTDAVAIGGNAKATAANSVALGSNSTTTANLSA
AGYNPGTAALSGTASAANGEVSVGSAGKERRITNVAAGSAATDAVNVSQLQSEDAKVNTV
NNNVNNLSNNVTSIAGNVTNISNTVNNITNGAGIKYFHANSTLADSSATGTDAVAIGGNA
SATTANSVALGSNSVANSATLATAGFTPAGGTAISAATAAGGEVSVGVAGKERRITNVAA
GLNATDAVNVSQLQSEDAKVNNVSNNVSNLSNNVSNIAGNVTNISNTVNNITNGGTGIKY
FHANSTLADSSATGTDAVAIGGNASATTANSVALGSNSLANSATLATAGFTPAGGTAISA
ATAAGGEVSIGAAGKERRITNVAAGLNATDAVNVSQLQSEDAKVNNVSNNVSNLSNNVSN
IAGNVTNISNTVNNITNGGNGIKYFHTNSTLADSSATGTDAVAIGGNAKATAANSVALGS
NSTTTANLSAAGYNPGTAALSGTASAANGEVSVGSAGKERRITNVAAGSAATDAVNVSQL
QSEDAKVNNVSNNVSNLSNNVTNISNTVNNITNGAGLKYFHANSTLADSSATGTDAVAIG
GNASATTANSVALGSNSVANSATLATAGYTPAGGTAISAATAVGGEVSVGAAGKERRITN
VAAGLNGTDAVNVSQLQSEDAKVNTVNNNVNNLSNNVSNIAGNVTNISNTVNNITNGGNG
IKYFHANSTLADSSATGTDAVAIGGNASATTANSVALGSNSVANSATLATAGFTPAGGTA
ISAATAVGGEVSVGKSGSERRITNVAAGLNGTDAVNVSQLQSEDAKVSNVSNNVSNLSNN
VTNISNTVNNITNGAGLKYFHANSTLADSSATGTDAVAIGGNASATTANSVALGSNSVAN
SATLATAGFTPAGGTAISAATAAGGEVSVGAAGKERRITNVAAGLNGTDAVNVSQLQSED
AKVNTVNNNVNNLSNNVSNIAGNVTNISNTVNNITNGGNGIKYFHADSTLADSSATGTDA
VAIGGNASATTANSVALGSNSVANSATLATAGYTPAGGTAISAATAVGGEVSVGAAGKER
RITNVAAGLNGTDAVNVSQLQSEDAKVSNVSNNVSNLSNNVTNISNTVNNITNGGSGLKY
FHANSTLADSSATGTDAVAIGGNASATTANSVALGSNSVANSATLATAGFTPAGGTAIAA
ATAAGGEVSVGAAGKERRITNVAAGLNGADAVNVSQLQSEDAKVNNVSSNVSNLSNNVSN
IAGNVTNISNTVNNITNGGNGIKYFHANSTLADSSAMGTDAVAIGGNASATTANSVALGS
NSLANSATLATAGFTPAGGTAISAATAAGGEVSVGAAGKERRITNVAAGLSATDAVNVSQ
LQSEDAKVNNVSNNVSNLSNNVSNIAGNVTNISNTVNNITNGGNGIKYFHANSTLADSSA
TGTDAVAIGGNASATTANSVALGSNSVANSATLATAGFTPAGGSAISAATAVGGEVSVGK
SGSERRITNVAAGLNGTDAVNVSQLQSEDAKVSNVSNNVSNLSNNVTNISNTVNNITNGG
NGIKYFHANSTLADSSATGADAVAIGGNASATTANSVALGSNSTTTANLSAAGYNPGSGT
LSGMASAANGEVSMGSVGKERRITNVAAGSAATDAVNVSQLQSEDAKVNTVNNNVNNLSN
NVSNIAGNVTNISNTVNNITNGGNGIKYFHANSTLSDSSATGTDAVAIGGNASATTANSV
ALGSNSVANSATLATAGYTPAGGTAISAATAVGGEVSVGAAGKERRMTNVAAGLNATDAV
NVSQLQSEDAKVNTVNNNVNNLSNNVSNIAGNVTNISNTVNNITNGGNGIKYFHTNSTLA
DSSATGVDAVAIGGNASATTANSVALGSNSVANSTTLTTAGFNPGGSAISAATATGGEVS
VGAAGKERRLTNVAAGLNATDAVNVSQLQSEDAKVNQIGTSTASSLGGGSTYNTTTGTIT
NPTYVAGGSTFSNVGDVVTNIDNRTTQNTTEIKNLTTNINNGSVGLVQQDSTSRNITVAK
DTDGAMVDFTGTAGTRTLTGLTAGAVNAMSVDAVNGSQLYGVSQSTADALGGGSTVNPDG
TISAPTYVAGGSTFNNVGEVITNIDGRVTQNTTAISNINNVLNNINSGSGVTYFHANSSL
ADSQATGMESVAIGGNAQSLAANSVALGSNSVANRVNTVSVGSAGNERQITNVAAGTADT
DAVNVAQLKASGVINPDGTTNAAVTYDRKADGTTNYNSVTMGNGAAGGTTIHNVAAGTAG
DDAVNVNQMNAVISAVTNIATAASNPMFAADGNRDTEAAVASGTHSTAMGANAKATGANS
VALGASSVADRDNTVSVGSAGNERQVTNVAAGTATTDAVNVGQLNEAIGSSLGNLPAGMT
AKDYTDKQINSVQNSVSQVAKNAYAGIAAATALTMIPDVDQGKTIAVGVGGGTYKGSQAV
ALGVSARITENLKMKVGAGTSSQGTTVGLGASYQW