Protein Info for BPHYT_RS14070 in Burkholderia phytofirmans PsJN

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 242 PF13599: Pentapeptide_4" amino acids 44 to 124 (81 residues), 49.2 bits, see alignment E=8e-17 amino acids 118 to 199 (82 residues), 47.6 bits, see alignment E=2.5e-16 PF00805: Pentapeptide" amino acids 44 to 76 (33 residues), 22.9 bits, see alignment 7.8e-09 amino acids 73 to 110 (38 residues), 22.9 bits, see alignment 7.4e-09 amino acids 97 to 135 (39 residues), 33.9 bits, see alignment 2.8e-12 amino acids 149 to 186 (38 residues), 28.1 bits, see alignment 1.8e-10 amino acids 172 to 211 (40 residues), 41.4 bits, see alignment 1.3e-14 amino acids 189 to 217 (29 residues), 29.1 bits, see alignment (E = 8.8e-11) PF13576: Pentapeptide_3" amino acids 150 to 192 (43 residues), 32.5 bits, see alignment 1.2e-11 amino acids 179 to 224 (46 residues), 29 bits, see alignment 1.6e-10

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_2842)

Predicted SEED Role

"FIG00455083: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2SZP8 at UniProt or InterPro

Protein Sequence (242 amino acids)

>BPHYT_RS14070 hypothetical protein (Burkholderia phytofirmans PsJN)
MSLDSTAPASGAQAHVVTDAALTRAEVERLVAASLAGNKAPLHFTDCDFEGVDLSRLDLR
GAEFQRCTIVETSFFGAALSHTRWVRCRGREADFASADLVDAAFQSSDLNNTSWRRAKLA
SASFHSCKLTGANFEACTALGLSFVETLLVGAHLRGLSFRKATLQQLDFSDADLAGVDFR
EAIFDGGSLKDAHLKGARFDGADLREADLSGVRLVDAALFKGATISHAQAAVLVTELGLR
VM