Protein Info for BPHYT_RS12470 in Burkholderia phytofirmans PsJN

Annotation: major facilitator transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 432 transmembrane" amino acids 9 to 33 (25 residues), see Phobius details amino acids 42 to 62 (21 residues), see Phobius details amino acids 82 to 106 (25 residues), see Phobius details amino acids 128 to 150 (23 residues), see Phobius details amino acids 170 to 189 (20 residues), see Phobius details amino acids 225 to 248 (24 residues), see Phobius details amino acids 260 to 281 (22 residues), see Phobius details amino acids 288 to 306 (19 residues), see Phobius details amino acids 326 to 350 (25 residues), see Phobius details amino acids 369 to 389 (21 residues), see Phobius details amino acids 395 to 413 (19 residues), see Phobius details PF07690: MFS_1" amino acids 10 to 378 (369 residues), 62 bits, see alignment E=2.5e-21

Best Hits

KEGG orthology group: None (inferred from 100% identity to bpy:Bphyt_2519)

Predicted SEED Role

"Probable transmembrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See B2SXQ8 at UniProt or InterPro

Protein Sequence (432 amino acids)

>BPHYT_RS12470 major facilitator transporter (Burkholderia phytofirmans PsJN)
MKKGFYTIIAAQFVSSLADNALLIAAIALLSVIRSAAWVTPLLQIFFTVSYVLLAPFVGA
FADSMQKRHVMFISNALKASGCLMMIAGVHPMIAYGVVGFGAAAYSPAKYGILTELLPAE
KLVKANAWLESATVLSTIVGTMVGGALISTFADKFVAHAHLPLIRSSADLAMFATMVTYA
IAAAINIFIPDTGARYENRLSEPKKLVGDFYHCFNVLWADKLAQIALWVTTLMWGGAVTL
QLLVLKWANVNLGLSLSKAAIMQGVTGLGIAVGAAAAAALIPLRKSLRVLPIGILTGAVA
IAMAFYNKDLFPPGSGIRIGTYVLPFYILLAYPLMILLGALSGFFIVPMNAILQHRGATL
LSAGHSIAVQNFNQNLAVLLMLGVYALLLTAKMPAQWIIVVFGTFITFMMWLAKRRSAVN
ERAVDMRAMVEE